Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 122 8e-23
seq11714 93.3 4e-14
seq9898 87.8 2e-12
>seq10290
Length=4455921
Score = 122 bits (134), Expect = 8e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || ||||| ||||||||||| || || || || |||
Sbjct 2172856 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAAACTATTACCCTTGAGGTTGAGCCCAGT 2172915
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || ||| ||||| || ||||| ||||| || || || ||||||
Sbjct 2172916 GACACCATTGAAAACGTGAAAGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAA 2172975
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | || ||||| || || ||||| |||||| | | | | | || || || |||
Sbjct 2172976 CAAAGGCTTATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACCCTCTCCGACTACAAC 2173035
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || || ||||| || || ||||| || ||||
Sbjct 2173036 ATCCAGAAAGAATCCACTCTTCACTTAGTCCTGCG 2173070
Score = 114 bits (126), Expect = 1e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || ||||| || || || || || || ||| |
Sbjct 2170709 ATGCAGATCTTTGTGAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTGGAGCCCAGC 2170768
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || ||||| || ||||| ||||| || || || |||||
Sbjct 2170769 GACACGATTGAAAATGTTAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAG 2170828
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||| || ||||| |||||| | | | | || || || |||
Sbjct 2170829 CAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCTGACTACAAC 2170888
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || || ||||| || || || ||||
Sbjct 2170889 ATCCAGAAAGAATCCACCCTCCATCTTG 2170916
Score = 105 bits (116), Expect = 6e-18
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || || || || || || || || || |||
Sbjct 2171165 ATGCAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGGAGGTGGAGCCCAGT 2171224
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 2171225 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 2171284
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||| || ||||| || ||| | | | | | || || || ||
Sbjct 2171285 CAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGGCGCACCCTCTCCGACTACAAT 2171344
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| |||||||| || || || || ||||
Sbjct 2171345 ATCCAAAAGGAGTCCACCCTCCATCTTG 2171372
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || || || || || || || || || |||
Sbjct 2173084 ATGCAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGGAGGTGGAGCCCAGT 2173143
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 2173144 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 2173203
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| || || ||||| || || | | |||| || || |||
Sbjct 2173204 CAGAGGTTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGTACTCTGTCTGACTACAAC 2173263
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || || ||||| || || || ||||
Sbjct 2173264 ATCCAGAAAGAATCCACCCTTCATCTTG 2173291
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| || || || || || || || | || || || ||| |
Sbjct 2170937 ATGCAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTTTGGAGGTGGAGCCCAGC 2170996
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| ||||| || || || |||||
Sbjct 2170997 GACACCATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAG 2171056
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||| |||||||| || ||||| || || | | |||| || || |||
Sbjct 2171057 CAGAGGCTGATTTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTGTCTGACTACAAC 2171116
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
||||| || ||||| || || || ||||
Sbjct 2171117 ATTCAGAAAGAATCCACCCTCCATCTTG 2171144
>seq11714
Length=3826745
Score = 93.3 bits (102), Expect = 4e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 139121 TGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGAT 139180
||||||| ||||| || | |||| ||||| | ||||| || |||||||| || || |
Sbjct 1502035 TGTATTCTACAATCTCAGTGCACAGGTTACTGGATTTGATGGTGCCTAAATTCTGCTGGT 1502094
Query 139181 TGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTG 139240
| || || | ||||| ||||||||||| ||||| |||||||| || || || ||||
Sbjct 1502095 TACTCTTCCTATTACATGCATCTTTGTAGAGCATGTACGGTGTCCCTGTCTCTGTCTGTG 1502154
Query 139241 TCTCTATAATG 139251
||| ||||||
Sbjct 1502155 ACTCAATAATG 1502165
>seq9898
Length=4754808
Score = 87.8 bits (96), Expect = 2e-12
Identities = 381/598 (64%), Gaps = 15/598 (3%)
Strand=Plus/Minus
Query 139409 TCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCG 139468
||||||||| ||| || ||||| | || | | | || || ||| ||| || ||
Sbjct 100417 TCATGAACAAATCAGGGATCCATAGGGCATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTT 100358
Query 139469 AACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGAT 139528
||| |||| || | | |||||| ||||| |||||| ||||||||| || || |
Sbjct 100357 TACCAGTGTTCTTCTTTAACTCAAGGAAGTCAAACACGTCAAAGTGCCATGGCTCAAGGT 100298
Query 139529 AGATGGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTAT 139585
| ||||| | || || ||||| ||||||||| || |||| || | | || |
Sbjct 100297 ACATGGCAAAGGCACCAGGTCGTTTATTGCCACCTTGGTCCACGTAGCGCGCCGTGTTGT 100238
Query 139586 TGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGAC 139645
|| | || | || ||| ||| | || || | | | || || || | | ||| |
Sbjct 100237 TGTACACCCTCAGCATTGGCACAAGGCCATTTGAATTACCATTTGTTCCAGCAATGTAGC 100178
Query 139646 T----GTTGCGAGCTCGGACGTCATGTACATTGATGC--CGATTCCGCCGCCAAATTTGG 139699
| |||| || | | || || | || | | | || || || || ||||||
Sbjct 100177 TTCCTGTTGA----TCTAATG-CAGCTA-ACTGCTACACCAATCCCTCCTGCAGATTTGG 100124
Query 139700 ATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCG 139759
| || | | |||| | | ||| || || || || |||||||| |||| ||| |
Sbjct 100123 AGATGAGAGCGCATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCATCCTTCATGG 100064
Query 139760 TGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGAC 139819
| ||| ||||| || || || ||| || ||||| || |||||||| |||
Sbjct 100063 CCAGCAGGAAGCAACTAGAGAGCTGTGGTCTGTTGGTGCCTGCATTGAACAGAGTGGGAG 100004
Query 139820 TCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATAT 139879
|| || |||||| | | |||| || | ||| || || ||||| ||||||
Sbjct 100003 AGGCATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCAATAT 99944
Query 139880 CCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCG 139939
| || |||||| || |||| |||| ||| ||||| || || || || ||||||
Sbjct 99943 CAGTTTTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGACGCTCAGCCACCT 99884
Query 139940 CGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATA 139997
||| | |||||| ||| || | |||||||||||| |||||||| | ||||
Sbjct 99883 TGCCATTGATTTTCAGCAGGTAGGAGCGCTCTAGGGTCTTAAAGCCAAAGAAATTATA 99826
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182
|| || ||||| || | ||||| ||||| || ||||| || || ||||| || |||||
Sbjct 100703 TACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATAGTGCCCAAATTCTGCTGATTA 100644
Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242
|| || | |||||| ||||||||||| | ||| || || || || ||||| || | |
Sbjct 100643 CTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGAGTTCCTGTTTCAGTCTGAGAC 100584
Query 139243 TCTATAATG 139251
||||| |||
Sbjct 100583 TCTATGATG 100575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449804133773600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |