Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 125 5e-24
>seq10290
Length=4455921
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||| || || | |||| |||||| || || || ||||| ||
Sbjct 2171391 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGAG 2171332
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| || || ||||| ||||| ||||||| | ||||| ||| | ||
Sbjct 2171331 AGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 2171272
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | ||| ||| ||| ||
Sbjct 2171271 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 2171212
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || |||||||| || |||||||| || ||||||||||||||
Sbjct 2171211 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2171165
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || |||| | |||||| || || | |||| || ||||| ||||| ||||| ||
Sbjct 2170935 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAG 2170876
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || ||||| ||||| ||||||| | ||||| ||| | ||
Sbjct 2170875 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 2170816
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || || | | |||| || ||| ||| ||
Sbjct 2170815 ATGCCTTCCTTGTCCTGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCCACC 2170756
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| ||| ||||| || || |||||||| || ||||||||||||||
Sbjct 2170755 TCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170709
Score = 120 bits (132), Expect = 2e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||| | ||||| ||| || ||||| ||||| ||||| || ||| | ||| ||||
Sbjct 2173068 CAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCATC 2173009
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || || || || || | ||| || ||| | || | || ||||||||
Sbjct 2173008 CTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCTTCCTTGTC 2172949
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || ||| ||| | | || | ||| ||| ||| || |||| ||| || ||
Sbjct 2172948 CTGAATCTTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTAATAGT 2172889
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
|| || ||||||||||| |||||||| ||||||||
Sbjct 2172888 TTTGCCGGTGAGGGTCTTGACAAAGATTTGCATGAT 2172853
Score = 105 bits (116), Expect = 4e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || |||| | |||||| || || | |||| || ||||||||||| ||||| ||
Sbjct 2171163 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGAC 2171104
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| | || || || ||||| ||||| || ||||| | ||||| ||| | ||
Sbjct 2171103 AGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGA 2171044
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | || ||| ||| |
Sbjct 2171043 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCAC--ATTCTCAATGGTGTCGCTGGGCTCCA 2170986
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || |||||||| || |||||||| || ||||||||||||||
Sbjct 2170985 CCTCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || || |||| |||| || ||||| ||||| ||||| || || | || | ||
Sbjct 2173295 AGAACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCT 2173236
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| || ||||||| | ||||| ||| | || | || ||||||||
Sbjct 2173235 TCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 2173176
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | ||| ||| ||| || || | || ||||||
Sbjct 2173175 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 2173116
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || |||||||| || ||||||||||||||
Sbjct 2173115 TTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2173084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325626828887780
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