Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq10289 347 9e-90
seq13501 98.7 7e-15
>seq10289
Length=12717785
Score = 347 bits (384), Expect = 9e-90
Identities = 959/1459 (66%), Gaps = 16/1459 (1%)
Strand=Plus/Minus
Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485
|||| |||||| ||||| ||||| || || | |||||||| || ||||| || |||||
Sbjct 4424068 GCAGACACATTGAGAATGCCATTAGCGTCGATGTCAAATGTTACCTCAATCTGTGGGACT 4424009
Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545
||||| | || |||||||||||| || | ||| | || || ||||| ||||||
Sbjct 4424008 CCTCTTGGGGCTGGTGGGATCCCTGTCAGGTCAAACTTGCCAAGGAGGTTATTGTCTTTA 4423949
Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605
|| | | |||||| || || | ||||| ||| | | |||||||| || ||
Sbjct 4423948 GTCATGGCCCTTTCACCTTCAAAGACCTGGATGAGCACTCCCGGCTGATTATCGGAGTAC 4423889
Query 281606 GTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664
|| | || | ||||| ||| ||| || ||||| ||||| | | || | |||
Sbjct 4423888 GTGGAGAAGA-TCTGGGTTTGTTTGGTGGGGATTGTGGTGTTACGTTTGATCAGTGCGGT 4423830
Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724
||| | ||||| ||||| || | || | ||| || |||| ||||||| || | |
Sbjct 4423829 CATTACTCCACCTGCTGTCTCAATGCCCAAAGACAGTGGAGCAACATCAAGCAGAAGGAG 4423770
Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 281784
| || | || ||| || | || | || ||||| || || | ||||| |||||
Sbjct 4423769 GTCCTGGACATTCTCAGAGGTGTCCCCCATCAGGATAGCAGCCTGGACCGCAGCTCCATA 4423710
Query 281785 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 281844
|| || |||||||| || || | ||| || | | | ||||| || || |
Sbjct 4423709 GGCCACGGCTTCATCCGGGTTGATGCTTTTGTTCAAGTCCCTTCCATTAAAGAAGTCCTG 4423650
Query 281845 AAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 281904
|| |||| | | || ||||| | | ||||| || || | ||||| || | |
Sbjct 4423649 CAGCAGTTTTTGGATTTTGGGAATTCTTGTGGATCCGCCCACCAGGACAATGTCGTTGAT 4423590
Query 281905 CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCT 281964
|| ||||| ||||| || | ||| |||| |||| ||||| || || || | ||
Sbjct 4423589 CTTGGATTTGTCCAGCTTGGCATCTTGTAAAGCTTTCTCAACAGGGTCTAGTGTGCCCCT 4423530
Query 281965 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCA 282022
|| | |||||| |||||||| ||| |||| ||| || ||| | || || |||
Sbjct 4423529 GAAGAGGTCTGAGTTTAGTTCTTCAAATCGGGCTCGAGT--GATTGAGGTGTAAAAGTCA 4423472
Query 282023 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGT 282082
||||| || | | ||| |||| ||| || | | ||| || || ||||| | |
Sbjct 4423471 ATTCCCTCATATAGAGAGTCAATTTCGATGCTTGCTTGGGTGCTGGATGATAGAGTCCTC 4423412
Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT--TGCTGATTGATTCAAAT 282140
|| || |||||||| ||||| | || || | | ||| | || | ||| | | |
Sbjct 4423411 TTGGCGCGTTCACAAGCTGTACGCAGCCTCCTCACCGCTCTCTTGTT--TTGGCTGATGT 4423354
Query 282141 CTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAAT 282200
|| |||| | |||||||| || || |||||| | | || | ||||| ||||| |
Sbjct 4423353 CTTTTTTGTGCTTTCTCTTAAACTCATCAACAAAGTGCTTCACCATGCGATTGTCAAAGT 4423294
Query 282201 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA 282260
|||| || ||||| | || | ||| | || ||| | || | |||| ||||||||||
Sbjct 4423293 CTTCTCCACCCAAGTGTGTGTCTCCAGCTGTGGCTTTCACCTCAAAAATGCCATCTTCAA 4423234
Query 282261 GAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT 282320
| || || | || ||| || |||||||||| |||||| || || ||||| |
Sbjct 4423233 TTGTCAGAATGGATACGTCAAAAGTGCCACCACCCAGATCAAAGATGAGAACATTTCGCT 4423174
Query 282321 CTTTGTCTTGGTTT---TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377
| |||| ||| || || |||||||| |||| ||| || |||||||||||||| |
Sbjct 4423173 CCCC-TCTT--TTTCCCTTGTCTAGACCATATGCAATAGCTGCTGCAGTTGGTTCATTGA 4423117
Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437
| ||||||| ||||| | ||||| ||| |||||||||||| |||||||| | || |
Sbjct 4423116 TGATTCTCAGGACATTCAAACCAGAAATAACTCCTGCATCTTTTGTGGCTTGGCGCTGGG 4423057
Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG 282497
| || || ||||| ||||| || || || || |||| | ||| || || | ||| |
Sbjct 4423056 AGTCATTGAAATAAGCAGGGACTGTGATGACTGCATTGGACACTCTTTGCCCCAAATACG 4422997
Query 282498 CGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATT 282557
| ||| ||| ||||| ||| |||| |||||| || |||| ||||||| | |
Sbjct 4422996 CCTCTGCAATTTCCTTCATCTTAACCAAAACCATTGACGAGATTTCTTCTGGATAGAACG 4422937
Query 282558 GCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTT 282617
||| | ||| || || |||| | | || || || || | || ||||
Sbjct 4422936 CCTTTGTCTCACCTTTGTACTCCACTTGTACTTTGGGCTTGCCACTGTCACTGATCACTT 4422877
Query 282618 TAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTA 282677
| || |||||| ||||| || | || ||| | |||||| ||| | ||| || || |
Sbjct 4422876 TGAAAGGCCAAAGCTTCATGTCAGCCTGCACAATAGGGTCATCAAATTTTCTCCCGATGA 4422817
Query 282678 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCAT 282737
|| || |||||||| || || || | || || | || | || | ||| || || |
Sbjct 4422816 GTCTCTTGGCATCAAAGATGGTGTTAGCCGGGTTCATGGCCACCTGGTTTTTAGCAGCGT 4422757
Query 282738 CTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 282797
| ||||| || || || || || || | ||| || || || ||||| || || |
Sbjct 4422756 CACCAATTAGCCTCTCGGTGTCAGTGAAGGCAACGTAACTGGGGGTGGTGCGGTTGCCCT 4422697
Query 282798 GATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTG 282857
| ||||| || || || || ||||| |||| || | || || || || | || |
Sbjct 4422696 GGTCATTGGCGATGATCTCCACTTTGCCATGCTGGAAAACGCCCACGCAGGAGTAGGTGG 4422637
Query 282858 TTCCTAAATCAATACCAAT 282876
|||| | ||||| |||||
Sbjct 4422636 TTCCCAGGTCAATGCCAAT 4422618
Score = 87.8 bits (96), Expect = 1e-11
Identities = 109/148 (74%), Gaps = 1/148 (1%)
Strand=Plus/Minus
Query 86103 TTTTTCACTTC-CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAA 86161
|||||| ||| ||| ||| ||||||| ||||||||||||||||||||| || ||| | |
Sbjct 4423167 TTTTTCCCTTGTCTAGACCATATGCAATAGCTGCTGCAGTTGGTTCATTGATGATTCTCA 4423108
Query 86162 GAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAA 86221
| |||| ||||| | ||| | | ||| || ||||| | ||| | |||||| |
Sbjct 4423107 GGACATTCAAACCAGAAATAACTCCTGCATCTTTTGTGGCTTGGCGCTGGGAGTCATTGA 4423048
Query 86222 AATATGCTGGTACAGTAATAACTGCttt 86249
|||| || || || || || ||||| ||
Sbjct 4423047 AATAAGCAGGGACTGTGATGACTGCATT 4423020
>seq13501
Length=12216461
Score = 98.7 bits (108), Expect = 7e-15
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440
||||| || ||||| || || ||| ||| ||| || |||| | ||| ||||||
Sbjct 9384794 TTAGTGATGGTAATCTTGTTTTCTTTCCCTGTGCTTTTGTCCACGGCTGACACGTTAAGA 9384735
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
|||||||||||||| | ||||| || || ||||| || ||||| ||||| ||||||||
Sbjct 9384734 ATACCATTGGCATCTATGTCAAAGGTCACCTCAATCTGGGGGACACCTCTTGGAGCAGGT 9384675
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 281547
||||| || | | ||| ||||||| | || || ||||||||
Sbjct 9384674 GGGATACCAGTGAGCTCAAACTTTCCCAGGATGTTGTTGTCTTTAGT 9384628
Score = 95.1 bits (104), Expect = 9e-14
Identities = 110/147 (75%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || | ||||| |||| || || || ||||||||||| ||||| | || |||
Sbjct 9383619 TTTTTGTCCAAGCCATAGGCAATGGCTGCTGCCGTTGGTTCATTGATAATACGCAGCACA 9383560
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
||||| |||||||| ||| |||||||| || || || | || || || || || ||
Sbjct 9383559 TTAAGCCCAGCAATAGCTCCAGCATCTTTGGTCGCCTGGCGCTGGGAGTCATTGAAGTAG 9383500
Query 282452 GCAGGAACAGTAATAACGGCATCTGTT 282478
||||| ||||| | ||| |||| ||||
Sbjct 9383499 GCAGGGACAGTTACAACTGCAT-TGTT 9383474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3739814428236120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |