Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq7767 91.5 1e-13 >seq7767 Length=11542515 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||||||||| || | ||| ||||| | || |||| || ||| ||| ||||| Sbjct 1440861 AGCATTTGGGGCCCCACCTGTGATGGTCTGGACCGCATAGTAGAGCAGTGCACTCTGCCC 1440920 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || || |||||||| |||||| | | ||||| ||||||||||| || | || | | || Sbjct 1440921 GACCTCCAAGTGGGAGACTGGTTGGTGTTTGAGAACATGGGCGCCTATA-CTGTGGCTGC 1440979 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 ||||| || || || ||||||| || || || | || ||||| |||||| Sbjct 1440980 GTCTTCCACATTCAATGGCTTCCAAAGACCGGACATTCATTATGTCATTTCA 1441031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463449298401600