Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq13501 109 1e-18 seq1 96.9 6e-15 >seq13501 Length=12216461 Score = 109 bits (120), Expect = 1e-18 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 58378 AGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCAT 58437 ||| || |||||||||| | | || ||||| || |||||| | || |||||||||||||| Sbjct 6011652 AGCCTTGTGGTGGTACTTTGTCTCCAAAGGTATTGAATACCTGGACACAGTGTTTTTCAT 6011593 Query 58438 ACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTT 58497 || ||||||||||| || || || | ||| | || || || || || | || ||||| Sbjct 6011592 TCTGAGGAAAAAGTTCAACCAGGTGACCTTCTTGCATGTGTACCACCACTGCACCATGTT 6011533 Query 58498 TACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 ||| | | ||| | || || |||||| | |||||||| ||| Sbjct 6011532 CACTCTGTGGTGGATTGGCATCAAATGGGTGGCAGGAGGACAG 6011490 >seq1 Length=17765049 Score = 96.9 bits (106), Expect = 6e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| ||| | ||||||||||| || |||||||| | || | || || || || Sbjct 7548992 GATAGCATCAGCTCTTTGGTGGTACTACATCTCTAAAGGAGTGGAGTTTTTGGACACTGT 7548933 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 |||||||| | ||||||||||| || || || || ||| ||||||| || ||||| | Sbjct 7548932 ATTTTTCATTTTGAGGAAAAAGTTCAACCAAGTCAGTTTTTTACACGTCTACCATCACTG 7548873 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAGG 58541 || ||||| | || | ||| | || || |||||| | | ||||| |||| Sbjct 7548872 CACCATGTTCATCTTGTGGTGGATTGGCATCAAATGGGTCCCCGGAGGACAGG 7548820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903223516323200