Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq10290 129 6e-25 seq9898 113 4e-20 >seq10290 Length=4455921 Score = 129 bits (142), Expect = 6e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| |||||||| || ||||| || | ||| | | | ||||| |||| Sbjct 2170912 ATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCCTCAAGCT 2170854 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || | || |||||| || || || |||||||||||||| |||| Sbjct 2170853 GCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCT 2170794 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| ||||||| |||||||||| || | ||||| ||||||||| | Sbjct 2170793 TGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTTTTGCCAG 2170734 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| || || |||||||| Sbjct 2170733 TGAGGGTTTTCACAAAGATCTGCAT 2170709 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||| |||||||| || ||||| || || ||| ||| |||||||| Sbjct 2171140 ATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCGTCTTCGAGCTG 2171081 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || |||| |||| |||||| || || || |||||||||||||| ||||| Sbjct 2171080 CTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTT 2171021 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| |||||| |||||||||| || | |||| ||| || || || Sbjct 2171020 GGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTCCCAGT 2170961 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || |||||||| Sbjct 2170960 GAGGGTTTTCACAAAGATCTGCAT 2170937 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| || || |||||||| ||| | ||| | || || ||||| Sbjct 2171368 ATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGAGAGGGTGCGCCCATCTTCAAGCTG 2171309 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || | || |||||| || || || |||||||||||||| |||||| Sbjct 2171308 CTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 2171249 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||| | ||||| |||||||||| || | |||| ||| || || || Sbjct 2171248 GGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGT 2171189 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || |||||||| Sbjct 2171188 GAGGGTTTTCACAAAGATCTGCAT 2171165 Score = 109 bits (120), Expect = 5e-19 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | |||||| |||||||| || ||||| || || || ||| ||| |||||| Sbjct 2173287 ATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGT--ACGGCCGTCTTCGAGC 2173230 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | || |||||| || || || |||||||||||||| |||| Sbjct 2173229 TGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATC 2173170 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | ||| | ||||| |||||||||| || | |||| ||| || || Sbjct 2173169 TTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTCCCA 2173110 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| || || |||||||| Sbjct 2173109 GTGAGGGTTTTCACAAAGATCTGCAT 2173084 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| |||||||| || ||||| ||| | || | ||||| ||||||||||| Sbjct 2173052 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCATCCTCAAGCTGCTTGCCA 2172993 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| |||| || || || || || |||||||||||||| ||||| || Sbjct 2172992 GCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTAGCTTTC 2172933 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| ||||||| || || | ||| | ||||||||||| || || Sbjct 2172932 ACGTTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTAATAGTTTTGCCGGTGAGGGTC 2172873 Query 133644 TTTACGAAAATCTGCATG 133661 || || || || |||||| Sbjct 2172872 TTGACAAAGATTTGCATG 2172855 >seq9898 Length=4754808 Score = 113 bits (124), Expect = 4e-20 Identities = 620/978 (63%), Gaps = 29/978 (3%) Strand=Plus/Minus Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296 ||||||| | || ||||| | || || | ||||||||| |||| ||| || | || Sbjct 101335 TCAGGTCCTTGAGCAGATGTGGGTTTACAATCTGAAACTCTCCGGAGAGGACTCTGCGTG 101276 Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 || | |||||| || | | ||| | ||||| |||||||| | || || || || | Sbjct 101275 TGTAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGG 101216 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416 || || |||||| || | || ||| ||| | || ||| | || | || || Sbjct 101215 AAGCAGTAGGCATGGGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCT 101156 Query 148417 GCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTC---CACATGTCGTACT 148473 ||| || | |||||||||||||| | ||| ||| ||| ||||||||||| | Sbjct 101155 CCTTAAGCAGCTTCCAGTCCCAGAGCGCAGTCGG---CACCTTCTCCCACATGTCGTATT 101099 Query 148474 GCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCG 148533 |||||||||| || | || || ||| | || || |||| | | Sbjct 101098 GCAGAATGCCCTTACTCACTGGAGAACCTGGGTATGTCTCATAAGGCCCGTCTTTTTCTG 101039 Query 148534 CCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 | | |||||||| ||||| || ||| ||||||| || ||||| || || |||| | Sbjct 101038 CTAACTCGCAGCTTGCCTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGATGTTCA 100979 Query 148594 GCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGC 148653 ||||| || ||||| | || ||||| | | || || || || || | Sbjct 100978 GCAGCTGGGCTTCAGGACTTTCAAATGGATAACGCATGAGAATGAAGGCATCTGCGAGAC 100919 Query 148654 CCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC---GA 148710 |||| || || | || || |||| ||| |||| ||| | || ||| || || Sbjct 100918 CCTGCACTCCAATTCCGATTGGCCTGTGGCGCTTGTTCGAG-TTCTCG-GCT-TCAGGGA 100862 Query 148711 GCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTC 148770 || |||| ||| ||| |||||||||| || || | || | || || || | Sbjct 100861 CTGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACAG 100802 Query 148771 TGCGCAGCAATTCAAAATC----GTAC-TTGTCATCTACGATGCATCGGTTCACGGCGAT 148825 | ||| || || || || | || | || || ||| ||| | || || Sbjct 100801 AGGCAAGCTTTTTGAAGTCAAAGGTCCGTTCTGGAGTAACATACAT--GTTAAGAGCAAT 100744 Query 148826 AGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCA 148885 ||| || | || || ||||| |||||| | | ||||| || ||||| | ||| Sbjct 100743 AGAAGCCAAGTTACAGACGGCTACCTCATCTTTGCTTGTATACTCCACAATCTCAGTGCA 100684 Query 148886 CAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTC 148945 || || ||||||||||| ||||| |||| ||||| ||||| ||||| || || || Sbjct 100683 CAAGTTACTGCATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGCATC 100624 Query 148946 CTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCAG 149005 ||||||| |||||| || || ||||| ||| | | |||||| || | Sbjct 100623 TTTGTACAACATGTAAGGAGTTCCTGTTTCAGTCTGAG---ACTCTATGATGGCATACCA 100567 Query 149006 GTCCTGCGCGCGCACTTG-CTGCTCGT----AGCGACCCTCCTGCTCGTATAAAGTATAC 149060 ||||| | || |||| | | ||| | || ||||||||||| ||| ||| Sbjct 100566 CACCTGC-TGAGC-CTTGACCACCCGTTTCACTCTGCCTTCCTGCTCGTAGCGAGTGTAC 100509 Query 149061 AGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATG 149120 ||| ||| ||| |||| || | || || || || || ||||||| |||||||| Sbjct 100508 AGCTTCTCAAACTCCTCCCCCCAACACTCATCCAGCCCAGGGCACTCACTGGGGCACATC 100449 Query 149121 AGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCG 149180 | ||||| | || | ||| | |||||| |||| ||| || | ||| || || Sbjct 100448 AAAGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAAATCAGGGATCCATAGGGCA 100389 Query 149181 TACATGAGGTCGCGCGCC 149198 || | |||||| || ||| Sbjct 100388 TAGAAGAGGTCTCGTGCC 100371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483320369328800