Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq4329 102 9e-17
>seq4329
Length=1543156
Score = 102 bits (112), Expect = 9e-17
Identities = 234/349 (67%), Gaps = 10/349 (3%)
Strand=Plus/Minus
Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005
||||| ||| | || || || |||| | ||| || ||||| ||||| ||| ||| | |
Sbjct 645026 GCCAGCTCTTTGGGCGAGCTGAAGTCATCCACATGGATGAAGGCGTCCCCCTGGAGGAAG 644967
Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065
|| || || |||| || | | || || || | ||| || | |||| ||| |
Sbjct 644966 TTCTCATAGTTCTGCCTGGGGGGACCCAGGACCACGGGCACTG----TGCCCACAGACAG 644911
Query 177066 CGG----TAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATA 177121
|| || ||||| || || || |||||| | || | |||||||||||| || || ||
Sbjct 644910 GGGGTTGTACAGTTTCTCTGTGATGTAGTCCTTATGGATGGAGTTCTCAAAGGCCAGGTA 644851
Query 177122 GAATTTACAGGAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTAC 177181
|||||| ||| | || |||| | |||| | |||| || || ||||| | |
Sbjct 644850 GAATTTGCAGCTGGCTATGGTGGGGAAGTAGTCCTGGTCGGAGATGTACTCTCCAAAGGC 644791
Query 177182 GTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCA 177240
| || || | || | || ||||| || |||||| |||||| || || | |
Sbjct 644790 CTGTCCATAGGCGTGCACCTCAATGTGCTTGTAGAGCTCATTGTAGTA-CTTGACCCGTA 644732
Query 177241 CGTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289
||||||| | |||||| |||||||||| |||||| | | |||| ||||
Sbjct 644731 CGTGGTCCTGGTTCCAGTTGCTGACGATCCAGCAGATGAGCTTGTTCTT 644683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578311830752000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |