Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq4329 102 9e-17 >seq4329 Length=1543156 Score = 102 bits (112), Expect = 9e-17 Identities = 234/349 (67%), Gaps = 10/349 (3%) Strand=Plus/Minus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| ||| | || || || |||| | ||| || ||||| ||||| ||| ||| | | Sbjct 645026 GCCAGCTCTTTGGGCGAGCTGAAGTCATCCACATGGATGAAGGCGTCCCCCTGGAGGAAG 644967 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || || || |||| || | | || || || | ||| || | |||| ||| | Sbjct 644966 TTCTCATAGTTCTGCCTGGGGGGACCCAGGACCACGGGCACTG----TGCCCACAGACAG 644911 Query 177066 CGG----TAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATA 177121 || || ||||| || || || |||||| | || | |||||||||||| || || || Sbjct 644910 GGGGTTGTACAGTTTCTCTGTGATGTAGTCCTTATGGATGGAGTTCTCAAAGGCCAGGTA 644851 Query 177122 GAATTTACAGGAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTAC 177181 |||||| ||| | || |||| | |||| | |||| || || ||||| | | Sbjct 644850 GAATTTGCAGCTGGCTATGGTGGGGAAGTAGTCCTGGTCGGAGATGTACTCTCCAAAGGC 644791 Query 177182 GTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCA 177240 | || || | || | || ||||| || |||||| |||||| || || | | Sbjct 644790 CTGTCCATAGGCGTGCACCTCAATGTGCTTGTAGAGCTCATTGTAGTA-CTTGACCCGTA 644732 Query 177241 CGTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289 ||||||| | |||||| |||||||||| |||||| | | |||| |||| Sbjct 644731 CGTGGTCCTGGTTCCAGTTGCTGACGATCCAGCAGATGAGCTTGTTCTT 644683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578311830752000