Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10290 87.8 4e-12 >seq10290 Length=4455921 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| ||||| || || || ||||||||||| ||||| ||| Sbjct 2170940 CAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTTTGGAGGTGGAGCCCAGCGAC 2170999 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || ||||| ||| || || || Sbjct 2171000 ACCATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAGCAG 2171059 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || || || ||||| |||||| | ||||| || | ||| || | || |||||| | Sbjct 2171060 AGGCTGATTTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTGTCTGACTACAACATT 2171119 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||||| || || || || ||||| Sbjct 2171120 CAGAAAGAATCCACCCTCCATCTTGT 2171145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181569138647020