Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 109 5e-19
seq10290 91.5 1e-13
>seq9898
Length=4754808
Score = 109 bits (120), Expect = 5e-19
Identities = 434/672 (65%), Gaps = 17/672 (3%)
Strand=Plus/Minus
Query 146938 TTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTA 146997
||||| ||| | | || | |||||||| ||||||| |||||| || |||| || |||
Sbjct 101267 TTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGGAAGCAGTA 101208
Query 146998 GGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA- 147056
|||||| |||| ||||| || | || ||| | | || || ||||| |
Sbjct 101207 GGCATGGGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCTCCTTAAGC 101148
Query 147057 AGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC 147116
|| || ||||||||| | || | ||| | | |||||||||||| || || | ||
Sbjct 101147 AGCTT-CCAGTCCCAGAGCGCAGTCGGCACCTTCTCCCACATGTCGTATTGCAGAATGCC 101089
Query 147117 TCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACA 147176
||| | ||| || | | | || || ||||| | || || || ||
Sbjct 101088 CTTACTCACTGGAGAACCTGGGTATGTCTCATAAGGCCCGTCTTTTTCTGCTAACTCGCA 101029
Query 147177 GCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGC 147236
||||||||| || || | |||||||| || || ||| || |||| || | ||
Sbjct 101028 GCTTGCCTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGATGTTCAGCAGCTGGGC 100969
Query 147237 TTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACC 147296
||| || || | || ||||| || | |||||||| || | |||||| | ||
Sbjct 100968 TTCAGGACTTTCAAATGGATAACGCATGAGAATGAAGGCATCTGCGAGACCCTGCACTCC 100909
Query 147297 GACGCCGATAGGTCGATG---CTT-TTCGT-TGCTGCGCTTCGCGCTCGCTATGGGATAG 147351
| ||||| || | || ||| |||| | || ||||| | | |||| |||
Sbjct 100908 AATTCCGATTGGCCTGTGGCGCTTGTTCGAGTTCTCGGCTTCAGGGAC----TGGG-TAG 100854
Query 147352 TGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGT 147411
| ||| ||||| |||||||||||||| | || | |||||||| | | ||
Sbjct 100853 TAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACAGAGGCAAGC 100794
Query 147412 TTCTCGAAATCATAAGTCCCGTCT-TCGACACGTACGCATTGGTTCACGGCGATAGACGC 147470
|| | ||| ||| | |||| ||| | || || ||| ||| | || ||||| ||
Sbjct 100793 TTTTTGAAGTCAAAGGTCCGTTCTGGAGTAACATA--CAT--GTTAAGAGCAATAGAAGC 100738
Query 147471 CAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTT 147530
|| || |||||||| ||| || | | |||| ||| || || | ||||| |||
Sbjct 100737 CAAGTTACAGACGGCTACCTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGTT 100678
Query 147531 GCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAA 147590
|||||||| || |||||||| |||||||| || |||| || || || |||||| |
Sbjct 100677 ACTGCATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGCATCTTTGTA 100618
Query 147591 GAGCATGTACGG 147602
| |||||| ||
Sbjct 100617 CAACATGTAAGG 100606
>seq10290
Length=4455921
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| || | ||| | | | || ||||| |||||||||||||| || || ||
Sbjct 2171151 CGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCG 2171092
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||||||||| || |||| | | || || | ||| |||||||| || |||||||| ||
Sbjct 2171091 TCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 2171032
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || |||| | || | || ||| | |||||||| || | || |
Sbjct 2171031 TCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATG 2170972
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||| || ||||| | || ||||||||
Sbjct 2170971 GTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| || | ||| | | | || ||||| || ||||||||||| | ||| || |
Sbjct 2170923 CGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA 2170864
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || ||||| || |||| | |||| | | ||| |||||||| || |||||||| ||
Sbjct 2170863 TCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTG 2170804
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | ||| | || ||| | |||||||| || | || |
Sbjct 2170803 TCCTGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCCACCTCAAGGGTGATG 2170744
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| ||||| || ||||| | || ||||||||
Sbjct 2170743 GTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170709
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || |||||||||||| | ||||||| ||| || ||||| || || | |
Sbjct 2173049 GATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCATCCTCAAGCTGCTTGCCAGCA 2172990
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || || | ||||||||||| || |||||||| || || ||| || |||||
Sbjct 2172989 AAAATAAGCCTTTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTAGCTTTCACG 2172930
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | || || | ||||| || || | || | ||||| || || || || ||
Sbjct 2172929 TTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTAATAGTTTTGCCGGTGAGGGTCTTG 2172870
Query 132110 ATGAAAATCTGCATGA 132125
| || || |||||||
Sbjct 2172869 ACAAAGATTTGCATGA 2172854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476512184023200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |