Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq1555 104 7e-19 seq10619 100 9e-18 seq10289 100 9e-18 seq13279 98.7 3e-17 seq11935 98.7 3e-17 seq8213 98.7 3e-17 seq7767 98.7 3e-17 >seq1555 Length=1860585 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1508016 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1507957 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1507956 CCGGGTTTCGGC 1507945 Score = 100 bits (110), Expect = 9e-18 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1356056 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1355997 Query 2829 CCGGGCTT 2836 ||||| || Sbjct 1355996 CCGGGTTT 1355989 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||| | Sbjct 1516084 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 1516025 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1516024 CCGGGTTTCGGC 1516013 Score = 96.9 bits (106), Expect = 1e-16 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 1510208 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAGTC 1510149 Query 2829 CCGGGCTT 2836 ||||| || Sbjct 1510148 CCGGGTTT 1510141 Score = 82.4 bits (90), Expect = 2e-12 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || ||| |||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 1536016 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCGGGTT 1535962 Score = 78.8 bits (86), Expect = 3e-11 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 |||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 1520242 TAGCTCAGTTGGGAGAGCGTTAGACTGAACATCTAAAGGTCCCTGGTT 1520195 >seq10619 Length=4378827 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1672357 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 1672416 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 1672417 CCCGGGTTTCGGC 1672429 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1710679 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 1710738 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 1710739 CCCGGGTTTCGGC 1710751 >seq10289 Length=12717785 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 2780647 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 2780706 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 2780707 CCCGGGTTTCGGC 2780719 >seq13279 Length=2863725 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 729309 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 729250 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 729249 CCGGGTTTCGGC 729238 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 737707 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 737648 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 737647 CCGGGTTTCGGC 737636 >seq11935 Length=3744941 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1224625 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1224566 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1224565 CCGGGTTTCGGC 1224554 >seq8213 Length=7130527 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct 456278 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGACCCTGGTTCAATC 456337 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 456338 CCGGGTTTCGGC 456349 Score = 98.7 bits (108), Expect = 3e-17 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 459246 GAAATAGATCAGTTGGGAGAGAGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCA 459305 Query 2832 GGCTTCAGC 2840 || |||||| Sbjct 459306 GGTTTCAGC 459314 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct 2501502 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGACCCTGGTTCAATC 2501443 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2501442 CCGGGTTTCGGC 2501431 Score = 91.5 bits (100), Expect = 5e-15 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| | Sbjct 340986 GCTGAAACAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGATCCCTGGTTCAGTC 340927 Query 2829 CCGGGCTT 2836 ||||| || Sbjct 340926 CCGGGTTT 340919 >seq7767 Length=11542515 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6123303 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6123244 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 6123243 CCGGGTTTCGGC 6123232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15846718839900