Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 125 6e-24
seq11085 107 2e-18
>seq10290
Length=4455921
Score = 125 bits (138), Expect = 6e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| || ||||| |||| | ||| ||| | || || |||||||| || |||||
Sbjct 2171356 CTCCTTTTGGATATTGTAGTCGGAGAGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAA 2171297
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| |||||| || | |||| || ||||||||| |||||| ||||| |
Sbjct 2171296 GATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 2171237
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || || || || | ||||||||
Sbjct 2171236 CTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCAC 2171177
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 2171176 AAAGATCTGCAT 2171165
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| || | | ||| || | || || |||||||| || |||||
Sbjct 2170899 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAG 2170840
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| |||||| || | |||| || ||||||||| ||||| ||| | | ||
Sbjct 2170839 ATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTAACATTT 2170780
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||||||| | |||||||| | ||||| ||||| || || | |||||||||
Sbjct 2170779 TCAATCGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTCACA 2170720
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 2170719 AAGATCTGCAT 2170709
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || ||||||||||| || | || || || |||| || |||||||| || |||||
Sbjct 2171127 TCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAA 2171068
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| ||||| ||||| | |
Sbjct 2171067 ATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTC 2171008
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | |||||||| | |||||||||| ||||| || || || || | |||||||||
Sbjct 2171007 TCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCACA 2170948
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 2170947 AAGATCTGCAT 2170937
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| || | || || || |||| || |||||||| || |||||
Sbjct 2173274 TCTTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCTTCGAGCTGCTTTCCAGCAAAG 2173215
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||||| |||||| || | |||| || ||||||||| |||||| ||||| |
Sbjct 2173214 ATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 2173155
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | |||||||||| ||||| || || || || | |||||||||
Sbjct 2173154 TCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACA 2173095
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 2173094 AAGATCTGCAT 2173084
>seq11085
Length=328877
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || ||||| || |||||||| || | | ||| | |||| ||
Sbjct 148051 CACCAAATGGAGGGTGGATTCCTTCTGCATGTTGTAGTCTGAGAGGGTATGACCGTCTTC 147992
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||||| ||||| |||| | ||||||||| | ||||| || ||| ||
Sbjct 147991 AAGCTGCTTACCAGCAAAAATCAGTCTCTGCTGGTCAGGAGGAATATCTTCTTTGCCCTG 147932
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||||||| ||| | | || | | ||||| || |||||||||| || |||||| |||||
Sbjct 147931 GATCTTTGCCTTAACATTTTCAATGGTGTCACTAGATTCCACCTGCAACGTGAT-GTTTT 147873
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
| |||| || || ||||| | |||||||
Sbjct 147872 TTCGGTCAGGGTCTTGACAAAGA-CTGCATT 147843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450699947629600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |