Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 623 1e-173
seq11714 140 4e-28
seq11381 123 3e-23
>seq9898
Length=4754808
Score = 623 bits (690), Expect = 1e-173
Identities = 1321/1954 (68%), Gaps = 23/1954 (1%)
Strand=Plus/Minus
Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGAT 68710
||||||| || || |||||||||| | | || || | | | || ||||| || |
Sbjct 101371 TATTCTTCATTTCCTCATTCCACAGTCCCCGTTCAGTCAGGTCCTTGAGCAGATGTGGGT 101312
Query 68711 TAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTT 68770
| || || ||||| || || || | ||||| || ||||| || || ||||| || | ||
Sbjct 101311 TTACAATCTGAAACTCTCCGGAGAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTT 101252
Query 68771 CCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCA 68830
| | || ||||| || || || ||||| || || || ||||| ||||| || |||| ||
Sbjct 101251 CGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGGAAGCAGTAGGCATGGGGGCCAACA 101192
Query 68831 ATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAA 68890
| | || || || | ||||||| | | || || || || || | ||||| ||||| |
Sbjct 101191 ACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGA 101132
Query 68891 GATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATC 68950
| ||| || || | ||| | |||||||| ||||| || ||||| | || |
Sbjct 101131 GCGCAGTCGGCACCTTCTCCCACATGTCGTATTGCAGAATGCCCTTACTCACTGGAGAAC 101072
Query 68951 CATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCAC 69010
| ||||| |||||||| || || | ||| |||| || || |||||||| | ||
Sbjct 101071 CTGGGTATGTCTCATAAGGCCCGTCTTTTTCTGCTAACTCGCAGCTTGCCTCCAGGGCGG 101012
Query 69011 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATG 69070
|||| || ||||| || || |||| | || || || ||||| |||| || ||||
Sbjct 101011 CGTAGTATATTGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCTTCAGGACTTTCAAATG 100952
Query 69071 GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130
||||| | | ||||| || |||||||| | ||||| || ||||| ||||| || || |
Sbjct 100951 GATAACGCATGAGAATGAAGGCATCTGCGAGACCCTGCACTCCAATTCCGATTGGCCTGT 100892
Query 69131 GTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 69190
| | ||| || || | || ||||| || | || || || ||||| || || || || |
Sbjct 100891 GGCGCTTGTTCGAGTTCTCGGCTTCAGGGACTGGGTAGTAGTTAATGTCAATGATCTTGT 100832
Query 69191 TAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCAT 69250
| || |||| || | ||||||| || || || || ||||| |||| |
Sbjct 100831 TGAGGTTTCTTACAATTACTTTAGTGACAGAGGCAAGCTTTTTGAAGTCAAAG-GTCCGT 100773
Query 69251 -CTA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306
|| ||||| |||| || || || | ||| || | ||||| || ||||||||||
Sbjct 100772 TCTGGAGTAACATACATGTTAAGAGCAATAGAAGCCAAGTTACAGACGGCTACCTCATCT 100713
Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366
||| ||| | | ||||| || || | ||||| ||||||||||| |||| |||
Sbjct 100712 TTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATAGTGCCCAAATTC 100653
Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426
|||||||||||||| |||||||||| || ||||| | || | ||||| || ||||||
Sbjct 100652 TGCTGATTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGAGTTCCTGTTTCA 100593
Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGC 69486
||||||| || || || | | ||| || | ||| || | || | | | || |
Sbjct 100592 GTCTGAGACTCTATGATGGCATACCACACCTGCTGAGCCTTGACCACC--CGTTTCACTC 100535
Query 69487 TTC--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCA 69544
| | || | || || | || || ||| || || || || |||||| |||||||
Sbjct 100534 TGCCTTCCTGCTCGTAGCGAGTGTACAGCTTCTCAAACTCCTCCCCCCAACACTCATCCA 100475
Query 69545 ATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCA 69604
||||| || ||| | || |||||||| ||||| | | | | | || | ||||
Sbjct 100474 GCCCAGGGCACTCACTGGGGCACATCAAAGACCAGTCCTGGTTGTTTTCCACCCTCTTCA 100415
Query 69605 TAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTT 69663
| || | ||| || ||||| || || ||| ||||| |||| | || | || || ||
Sbjct 100414 TGAACAAATCAGGGATCCATAGGGC-ATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTA 100356
Query 69664 CCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 69723
|| || || || || | || || || || | | ||| | |||||||| || || ||
Sbjct 100355 CCAGTGTTCTTCTTTAACTCAAGGAAGTCAAACACGTCAAAGTGCCATGGCTCAAGGTAC 100296
Query 69724 ATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTA 69783
|| || | | | || ||||||||||| || || || || | ||| | || ||||| ||
Sbjct 100295 ATGGCAAAGGCACCAGGTCGTTTATTGCCACCTTGGTCCACGTAGCGCGCCGTGTTGTTG 100236
Query 69784 TAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTT 69843
|| || |||||||| || | || ||||| || |||||||||||||||| ||| || |||
Sbjct 100235 TACACCCTCAGCATTGGCACAAGGCCATTTGAATTACCATTTGTTCCAGCAATGTAGCTT 100176
Query 69844 CCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGA 69903
||| ||| | ||| |||| | || ||| || |||||||| ||| ||||| |||
Sbjct 100175 CCTGTTGATCTAATGCAGCTAACTGCTACACCAATCCCTCCTGCAGATTTGGAGATGAGA 100116
Query 69904 GCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGA 69963
|| || |||| | ||| ||||| || || || ||||| ||||| ||||| || ||
Sbjct 100115 GCGCATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGG 100056
Query 69964 AAACAGCTAGACATTTGATGATGT-ATAGTTCCCGCATTAAATAATGTAGGAGATGCGTG 70022
|| || ||||| | || || | | | || || ||||| || | || ||||| || ||
Sbjct 100055 AAGCAACTAGAGAGCTG-TGGTCTGTTGGTGCCTGCATTGAACAGAGTGGGAGAGGCATG 99997
Query 70023 AGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTG 70082
||||||||| || ||||| ||||| ||||| || ||||| |||| || ||||| |
Sbjct 99996 AGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCAATATCAGTTTT 99937
Query 70083 ATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATT 70142
|| ||||| | || || | ||| | ||| ||||| || || || || || |||
Sbjct 99936 GTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGACGCTCAGCCACCTTGCCATT 99877
Query 70143 TATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTC 70202
||||||| |||||| || || || || ||||| ||||| | || || ||||| ||
Sbjct 99876 GATTTTCAGCAGGTAGGAGCGCTCTAGGGTCTTAAAGCCAAAGAAATTATAAGAAAAATC 99817
Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTA--ACTATATCCA-T 70259
|| || || || ||| |||| || || || | | |||| | || ||||| |
Sbjct 99816 CCTATCATAGATTATAGCAGAGTTGAGGCGGTC--TTTGTTTGCAAGGACAATATCTAGG 99759
Query 70260 AACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTT--AGGATTAACATAGTTGAAT 70317
| | || ||||| || || || || | | ||| ||| || |||||||||||
Sbjct 99758 GTCTCTTGG-GAGATCATGGGGGA--GTGGCGCTTGTTTAAAGGGTTGACATAGTTGAAC 99702
Query 70318 AAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCT 70377
| ||| ||||| || ||||| || | || || || || || || | || || | ||
Sbjct 99701 AGATCCTCCATGACGTCACTGAACACCTTCTTGGTCTCTTTATGGAGGTTGGAAACAGCA 99642
Query 70378 ATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCC 70437
|| | || || |||| ||||| || || || | || || || || || || |||
Sbjct 99641 ATGCGTGCAGCCAGAAGGGCATAATCGGGGTGCTTAGTGGTTAGTGTGGCAGCAATCTCC 99582
Query 70438 GCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTC 70497
||||| | || || || || | ||| || ||||| | || || ||||| || || |||
Sbjct 99581 GCAGCGAGTGTGTCCAACTCCACAGTGGTCACTCCACTGTACAGACCTTGGATCACCTTC 99522
Query 70498 ATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCTAATA 70557
|| | |||| || || | || || | ||| || || ||||| | ||| ||
Sbjct 99521 ATTGTGATTTGTGCGGGGTCCACAAACTCCGCGTTGAGCCCGTAACAGAGCTTTTGGATT 99462
Query 70558 CGAGATGTAATTTTATCAAACATAACATTCTCCT 70591
||||| || |||||||||||||| || |||||
Sbjct 99461 CGAGAGGTGATTTTATCAAACATGACGCGCTCCT 99428
Score = 93.3 bits (102), Expect = 6e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500
|||| || || || ||||| || || | |||| ||| |||| || || ||||||||||
Sbjct 101662 TCCAGCCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 101603
Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560
| | || || || || || ||| | || || | ||||| ||||| || | ||| |||
Sbjct 101602 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGGTCTGCAGCCATCTTGAGTATAGTCT 101543
Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGG 68609
| || | |||||||||| || ||| | | |||||| | |||||||||
Sbjct 101542 TCTGTGATATTTCCCAAACTGTTTTATACAGCTGTTTTAAATCATCTGG 101494
>seq11714
Length=3826745
Score = 140 bits (154), Expect = 4e-28
Identities = 142/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006
|| ||| ||||| |||||||||||| || || |||||||||||||||| ||||| ||
Sbjct 1501515 GAGCCAGCATATGATTCATAAGGTCCATCATGGGCAGCTAGTTCACAACTGGCCTCCAAA 1501574
Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066
||| | ||||| || || || ||||||| | ||||||| || |||||| ||| ||
Sbjct 1501575 GCAGCATAATATATGGTCTCAAAAATCTGGATGTTGAGATGCTGGGCTTCTTCACTTTCA 1501634
Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
||||||||| | | ||||| || || ||||| | |||||||| || || || ||||||
Sbjct 1501635 AATGGATAACGCATGAGAATGAAGGCGTCTGCAAGACCCTGAACACCGATTCCAATAGGT 1501694
Query 69127 CTATG 69131
|| ||
Sbjct 1501695 CTGTG 1501699
Score = 98.7 bits (108), Expect = 1e-15
Identities = 126/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500
|||| || ||||| ||||| ||||| |||||| ||| |||| || || || ||||| |
Sbjct 1500384 TCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATGTGAATGT 1500443
Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560
||| ||||| || || || ||| | || || | || |||||||| || | | | |
Sbjct 1500444 TCAGAGATTGGCTCTGGTCAATGTAGGCACCACGGTCAGCCGCCATCTTGAGGACCATTT 1500503
Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGC 68614
| |||| |||||||| | ||| || ||| ||| || | ||||||||||| ||
Sbjct 1500504 TCTGAGAGATTTCCCACACAGTTTTGTAAAGCTGCTTTAGATCATCTGGAATGC 1500557
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
|| || ||||| || | |||||| || |||||||| |||||||| || || ||||| |||
Sbjct 1503114 GTGCCAGCATTGAACAGTGTAGGGGAGGCGTGAGTAAACCATTTCTCTGAGAGCAGGTTG 1503173
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
|| || ||||| |||| || | ||| | |||||| || | || || | ||| | |
Sbjct 1503174 TAGGTCTCAATGGCTGCGTCCACATCTTGTTTATGAATCCCAACAGCCACTCTCATGAGC 1503233
Query 70111 ATATGCTGAGG 70121
|||||||||||
Sbjct 1503234 ATATGCTGAGG 1503244
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
||||| ||||| || | ||| || ||||||||||| || ||||| || || || | |||
Sbjct 1500825 TGAAACTCCCCTGAAAGCACCCTGCGAGTGTAAATGTTGCTGGTGTAAGGCTCAATGGAT 1500884
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCA 68827
||||| || || || || || ||||| || || || |||||||| ||||
Sbjct 1500885 TCATTGTTGCCAAGGATCTGGGCAGTGGAGGCTGTGGGCATAGGGGCCA 1500933
>seq11381
Length=12543884
Score = 123 bits (136), Expect = 3e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| || || | ||| || ||| | || || || ||||||||||| | |||||
Sbjct 9286990 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGACCGGGCATTAGACCCCTCTTTT 9286931
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| |||||| | ||||| ||||| |||||||| ||||| || || ||||| ||||||||||
Sbjct 9286930 TCAGCCAATAAATGGCCGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATG 9286871
Query 39759 CAACAAGTCTCTCTCC 39774
| |||| ||| || ||
Sbjct 9286870 CCACAATTCTTTCACC 9286855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686766094696800
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