Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 100 2e-16
>seq10290
Length=4455921
Score = 100 bits (110), Expect = 2e-16
Identities = 165/237 (70%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 27013 AATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071
||||| || || || | || |||| || | ||| | || || || ||||| ||||||
Sbjct 2171400 AATTACTGGCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTG 2171341
Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131
|||||| | | ||||| | ||||| ||||| || ||||| | || | | ||| |||
Sbjct 2171340 TAGTCGGAGAGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGA 2171281
Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191
|| || || | || || || || ||||||| |||| | | || | ||||| ||
Sbjct 2171280 TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG 2171221
Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || || || ||||| || | || || || || |||||||||||||| ||||||
Sbjct 2171220 GGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCATA 2171164
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| || || || | || || ||||| || || ||||||||| | | | ||| |
Sbjct 2173070 CGCAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCA 2173011
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
|| || ||||| || || || |||| || | |||||||| || || | || || ||
Sbjct 2173010 TCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCTTCCTTG 2172951
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||||| ||||| | |||| | ||||| ||| ||||| || || || |||
Sbjct 2172950 TCCTGAATCTTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTAATA 2172891
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| |||||| || || || || ||||||||||||||
Sbjct 2172890 GTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2172856
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| || | ||| | || || ||||| ||||| |||||||| || |||| ||
Sbjct 2171151 CGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCG 2171092
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||||||||| || ||||| |||| || | ||| ||||| || || | || || ||
Sbjct 2171091 TCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 2171032
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| |||||| |||| | || | ||||| ||| || || || | ||| ||
Sbjct 2171031 TCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATG 2170972
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || || || || |||||||||||||| ||||||
Sbjct 2170971 GTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCATA 2170936
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || ||||| || || |||||||| || | || ||||||||||||| || ||
Sbjct 2173280 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCTTCGAGCTGCTTTCCA 2173221
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || | | ||| ||||| || || | || || || || ||||||| |||
Sbjct 2173220 GCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2173161
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| ||| || || || ||||| || | || || || || |||
Sbjct 2173160 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTT 2173101
Query 27231 TTCACAAAGATTTGCATA 27248
||||||||||| ||||||
Sbjct 2173100 TTCACAAAGATCTGCATA 2173083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424848326881440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |