Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq10290 100 2e-16 >seq10290 Length=4455921 Score = 100 bits (110), Expect = 2e-16 Identities = 165/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 27013 AATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071 ||||| || || || | || |||| || | ||| | || || || ||||| |||||| Sbjct 2171400 AATTACTGGCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTG 2171341 Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 |||||| | | ||||| | ||||| ||||| || ||||| | || | | ||| ||| Sbjct 2171340 TAGTCGGAGAGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGA 2171281 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191 || || || | || || || || ||||||| |||| | | || | ||||| || Sbjct 2171280 TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTG 2171221 Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || ||||| || | || || || || |||||||||||||| |||||| Sbjct 2171220 GGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCATA 2171164 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| || || || | || || ||||| || || ||||||||| | | | ||| | Sbjct 2173070 CGCAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCA 2173011 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || || |||| || | |||||||| || || | || || || Sbjct 2173010 TCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCTTCCTTG 2172951 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||||| | |||| | ||||| ||| ||||| || || || ||| Sbjct 2172950 TCCTGAATCTTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTCAAGGGTAATA 2172891 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||||| || || || || |||||||||||||| Sbjct 2172890 GTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2172856 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| || | ||| | || || ||||| ||||| |||||||| || |||| || Sbjct 2171151 CGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCG 2171092 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||||||||| || ||||| |||| || | ||| ||||| || || | || || || Sbjct 2171091 TCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 2171032 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| |||| | || | ||||| ||| || || || | ||| || Sbjct 2171031 TCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATG 2170972 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || || |||||||||||||| |||||| Sbjct 2170971 GTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCATA 2170936 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || |||||||| || | || ||||||||||||| || || Sbjct 2173280 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCTTCGAGCTGCTTTCCA 2173221 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || | | ||| ||||| || || | || || || || ||||||| ||| Sbjct 2173220 GCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 2173161 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || ||||| || | || || || || ||| Sbjct 2173160 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTT 2173101 Query 27231 TTCACAAAGATTTGCATA 27248 ||||||||||| |||||| Sbjct 2173100 TTCACAAAGATCTGCATA 2173083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424848326881440