Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 95.1 2e-14
seq11381 86.0 8e-12
>seq11714
Length=3826745
Score = 95.1 bits (104), Expect = 2e-14
Identities = 108/144 (75%), Gaps = 6/144 (4%)
Strand=Plus/Plus
Query 111277 TGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC---TTAATCGTCCCCAAATTCTT 111333
|||||| |||| ||| || || || | ||| ||| || || || || |||||||
Sbjct 1502033 TGTGTATTCTACAATCTCAGTGCACAGGTT---ACTGGATTTGATGGTGCCTAAATTCTG 1502089
Query 111334 TTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 111393
|||||||||||| | || || ||||| |||||||||||||| || ||||| ||||| ||
Sbjct 1502090 CTGGTTACTCTTCCTATTACATGCATCTTTGTAGAGCATGTACGGTGTCCCTGTCTCTGT 1502149
Query 111394 CTGTGATTTGAGAATAGCCTTCCA 111417
|||||| | | ||| || | |||
Sbjct 1502150 CTGTGACTCAATAATGGCATACCA 1502173
>seq11381
Length=12543884
Score = 86.0 bits (94), Expect = 8e-12
Identities = 96/123 (78%), Gaps = 4/123 (3%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTG-AGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
||||||||| | ||||||||||| | | ||| | ||||| ||||| ||||||| |||
Sbjct 9286990 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTA-AGACCGGGCATTAGACCCCTCTTT 9286932
Query 122737 TTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795
|||| ||||||||| | |||| || || || |||||||| || ||||| ||| |||||
Sbjct 9286931 TTCAGCCAATAAATGGCCGCA-AAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAA 9286873
Query 122796 CGC 122798
||
Sbjct 9286872 TGC 9286870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627901526352000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |