Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 120 4e-22
seq9943 100 4e-16
seq11714 89.7 6e-13
>seq9898
Length=4754808
Score = 120 bits (132), Expect = 4e-22
Identities = 455/702 (65%), Gaps = 19/702 (3%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | || | | |||||||||| || | ||||| ||||||||
Sbjct 101273 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGGAA 101214
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| || |||||||| |||| | |||||||| | | ||| | || |||| |||
Sbjct 101213 GCAGTAGGCATGGGGGCCAACAACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCTCC 101154
Query 118302 TTGAG-AGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGA 118359
|| || ||| ||| |||| || | || | | | || || |||||| || | || |
Sbjct 101153 TTAAGCAGCTTCC-AGTCCCAGA-GCGCAGTCGGCACCTTCTCCCACATGTCGTATTGCA 101096
Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419
| || || | | |||| || || |||||||||| || || || || || |
Sbjct 101095 GAATGCCCTTACTCACTGGAGAACCTGGGTATGTCTCATAAGGCCCGTCTTTTTCTGCTA 101036
Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479
| ||| |||| ||||| ||||| |||| || ||||| ||||| || | ||||
Sbjct 101035 ACTCGCAGCTTGCCTCCAGGGCGGCGTAGTATATTGTCTCAAAGATCTGGATGTTCAGCA 100976
Query 118480 CCTTGGCCTCGTCGGAAT--CAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGAC 118536
|| ||| || ||| | |||| | || ||| | ||| || |||| |||||||
Sbjct 100975 GCTGGGCTTCA--GGACTTTCAAATG-GATAACGCATGAGAATGAAGGCATCTGCGAGAC 100919
Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---A 118593
| || || || | || ||||| | || | | | || || ||| ||| || |
Sbjct 100918 CCTGCACTCCAATTCCGATTGGCCTGTGGCGCTTGTTCGAGTTCT---CGGCTTCAGGGA 100862
Query 118594 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 118653
| || || | || | || || | | | || || ||| | | || || ||||
Sbjct 100861 CTGGGTAGTAGTTAATGTCAATGATCTTGTTGAGGTTTCTTACAATTACTTTAGTGACAG 100802
Query 118654 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 118713
|||||||| | | ||||| | || ||| | | |||||| | ||| || |
Sbjct 100801 AGGCAAGCTTTTTGAAGTCAAAGGTCCGT---TCTGGAGTAACATACATGTTAAGAGCAA 100745
Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773
| || |||| ||||| || | |||||| || || ||||| | ||| || ||||
Sbjct 100744 TAGAAGCCAAGTTACAGACGGCTACCTCATCTTTGCTTGTATACTCCACAATCTCAGTGC 100685
Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 118833
||||||| | || || |||||||| |||| ||||| ||| ||||||| ||||
Sbjct 100684 ACAAGTTACTGCATTTGATAGTGCCCAAATTCTGCTGATTACTCTTCCTGTTACAGGCAT 100625
Query 118834 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACT 118875
| ||||| | |||||| || || || || || || || ||||
Sbjct 100624 CTTTGTACAACATGTAAGGAGTTCCTGTTTCAGTCTGAGACT 100583
>seq9943
Length=499256
Score = 100 bits (110), Expect = 4e-16
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
||||||| | | ||||||||| || |||||| ||| || ||||| || || || ||||
Sbjct 292078 CCTCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCGTTTCT 292019
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154
| | ||||||||| || || || |||||||||||||||||||| ||| |||||||
Sbjct 292018 TGAGCCAGAAAATGGCGGCGAAGGATCCAGAGAAGAAGATCCCCTCGACAGCGGCGAACG 291959
Query 130155 CAAAGAGACGCTC 130167
| | | ||||||
Sbjct 291958 CCACCACACGCTC 291946
>seq11714
Length=3826745
Score = 89.7 bits (98), Expect = 6e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| || ||| | ||||| ||||||| | | |||||||| || | ||| ||||| ||||||
Sbjct 1500855 TAAATGTTGCTGGTGTAAGGCTCAATGGATTCATTGTTGCCAAGGATCTGGGCAGTGGAG 1500914
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
||||||||||| || |||| ||| ||||||||
Sbjct 1500915 GCTGTGGGCATAGGGGCCAGGAGGAGGCTGTT 1500946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618306720087200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |