Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 217 2e-51
seq9943 98.7 1e-15
seq11381 86.0 7e-12
>seq9898
Length=4754808
Score = 217 bits (240), Expect = 2e-51
Identities = 934/1447 (65%), Gaps = 46/1447 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| ||||| | || || | || || || || |||||| | | |
Sbjct 99898 CCACAGCACATGCTCATGAGAGTAGCTGTTGGAATCCACAAAACTGATATTGATGCAGCC 99957
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || | |||| | | || ||||| ||| || | || || || ||
Sbjct 99958 ATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGTT 100016
Query 104341 CAATGCTGGTACACCAA--GACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398
|||||| || |||||| |||| || | || ||||||||||| | |||| |||||
Sbjct 100017 CAATGCAGG--CACCAACAGACCACAGCTCTCTAGTTGCTTCCTGCTGGCCATGAAGGAT 100074
Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458
||| || | || || |||| || || | | || || | ||||| || | ||
Sbjct 100075 GACAGCATTGATGGCATTTATGATACACTCAAACAATGCGCTCTCATCTCCAAATCTGCA 100134
Query 104459 GGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCA-ATAAATCTCGTATTCGGGGGA 104516
|| || ||||| | ||| | || | ||| | | | || || ||| || |
Sbjct 100135 GGAGGGATTGGTGTAGCAGTTAGCTGCATT-AGATCAACAGGAAGCTAC-ATTGCTGGAA 100192
Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576
|||||||| | ||| |||| || | |||||||| | || | ||| ||| |||||||
Sbjct 100193 CAAATGGTAATTCAAATGGCCTTGTGCCAATGCTGAGGGTGTACAACAACACGGCGCGCT 100252
Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| || | |||| ||| | ||| || | | || | || |||||||||||||
Sbjct 100253 ACGTGGACCAAGGTGGCAATAAACGACCTGGTGCCTTTGCCATGTACCTTGAGCCATGGC 100312
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|| || | | || ||||||||||| ||| ||| | |||||| | ||
Sbjct 100313 ACTTTGACGTGTTTGACTTCCTTGAGTTAAAGAAGAACACTGGTAAAGAGGAGCAGAGGG 100372
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
|| || ||||||| || || ||||| || ||| | ||||||||||| || || | |
Sbjct 100373 CACGAGACCTCTTCTATGCCCTATGGATCCCTGATTTGTTCATGAAGAGGGTGGAAAACA 100432
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGG 104811
| |||||| | | || || || | || ||||| || || || | |||
Sbjct 100433 ACCAGGACTGGTCTTTGATGTGCCCCAGTGAGTGC-CCTGGGCTGGATGAGTGTTGGGGG 100491
Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGT 104871
||||||||||| || ||||| |||||| | ||||| | | || | |||
Sbjct 100492 -GAGGAGTTTGAGAAGCTGTACACTCGCTACGAGCAGGAAGGCAGAGTGAAACGGGTGGT 100550
Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931
||| | |||||| | || || | ||||||| || || || || || || ||
Sbjct 100551 CAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACTGAAACAGGAACTCCTTA 100610
Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991
|||| | |||||||| ||||||||| ||||||||||| |||||||||| |||||
Sbjct 100611 CATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAATCAGCAGAATTTGGGCACTATCAA 100670
Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051
| || | || || || || |||| | |||| |||||||||| || || ||
Sbjct 100671 ATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAGGTAGCCGTCTG 100730
Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTA 105111
|||| | || || || ||||| || |||||| |||||| | ||| ||||| |
Sbjct 100731 TAACTTGGCTTCTATTGCTCTTAACATGTATGTTACTCCAGA---ACGGACCTTTGACTT 100787
Query 105112 TGAAAAACTCCACGAAGTTACGAA---AACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168
|||| || | || || || || ||| | |||||| |||| | |||||
Sbjct 100788 CAAAAAGCTTGCCTCTGTCACTAAAGTAATTGT---AAGAAACCTCAACAAGATCATTGA 100844
Query 105169 TAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225
| || | ||||| || ||| || || || || | | | ||| | |||||
Sbjct 100845 CATTAACTACTACCCAGTCCCTGA---AGCCGAGAACTCGAACAAGCGCCACAGGCCAAT 100901
Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG--AT 105283
|| | || || ||||||||||| |||| |||||||| || | |||||| |
Sbjct 100902 CGGAATTGGAGTGCAGGGTCTCGCAGATGCCTTCATTCTCATGCGTTATCCATTTGAAAG 100961
Query 105284 TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT 105343
||| ||||| || | || | || |||||||| || || ||||||| ||
Sbjct 100962 TCC--TGAAGCCCAGCTGCTGAACATCCAGATCTTTGAGACAATATACTACGCCGCCCTG 101019
Query 105344 GAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 105403
||||| || | ||||| ||||| || || || ||||| || | |||||||||
Sbjct 101020 GAGGCAAGCTGCGAGTTAGCAGAAAAAGACGGGCCTTATGAGACATACCCAGGTTCTCCA 101079
Query 105404 GCTTCACAAGGG-GTGCTTCAATTTGATATGTGG--GAAGGTG-AGACCAAGCTTCACTA 105459
| | ||||| | || |||| || |||||| ||||||| ||| ||| ||
Sbjct 101080 G-TGAGTAAGGGCATTCTGCAATACGACATGTGGGAGAAGGTGCCGACTGCGCT---CTG 101135
Query 105460 CGACTGGGAAGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518
|||| ||||||| || ||||| || | | | ||| | | ||||| || |
Sbjct 101136 GGACT-GGAAGCTGCTTAAGGAGAAGATTACTAAACATGGTGTGAGGAACAGCCTGTTGT 101194
Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578
|||| || ||||| || || ||||| |||||||| | || || ||||| | | | |||
Sbjct 101195 TGGCCCCCATGCCTACTGCTTCCACAGCACAAATACTAGGCAACAATGAGTCCATCGAAG 101254
Query 105579 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638
||||||| | |||||||| | ||| |||| | ||||||||| |||||| |||
Sbjct 101255 CCTACACCAGCAACATCTACACACGCAGAGTCCTCTCCGGAGAGTTTCAGATTGTAAACC 101314
Query 105639 AGCATCT 105645
|||||
Sbjct 101315 CACATCT 101321
>seq9943
Length=499256
Score = 98.7 bits (108), Expect = 1e-15
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 94886
||| ||||| |||||||||||||| |||||| ||| |||| ||||||||||| |||||
Sbjct 291969 TGTCGAGGGGATCTTCTTCTCTGGATCCTTCGCCGCCATTTTCTGGCTCAAGAAACGAGG 292028
Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 94940
|| ||||| || || |||||||||||| || ||| | ||||||| |||
Sbjct 292029 CCTGATGCCCGGACTGACCTTCTCCAACGAACTCATCAGCAGAGACGAGGTACT 292082
>seq11381
Length=12543884
Score = 86.0 bits (94), Expect = 7e-12
Identities = 88/110 (80%), Gaps = 4/110 (4%)
Strand=Plus/Plus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCT 94874
|||||||| ||| ||||| || ||||||||||| ||||| ||| || |||||||||||
Sbjct 9286870 GCATTTGCAGCTGTAGAGGGAATTTTCTTCTCTGGATCCTT-TGCGGCCATTTATTGGCT 9286928
Query 94875 CAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT-CTCCAACGAGCTTATC 94923
|| ||| | ||||| ||||| ||||| | ||| ||||| || ||||||
Sbjct 9286929 GAAAAAGAGGGGTCTAATGCCCGGTCT-TACTTATTCCAATGAACTTATC 9286977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583139627568800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |