Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 123 2e-23
>seq10290
Length=4455921
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| | || ||||| || ||||| ||
Sbjct 2171165 ATGCAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGGAGGTGGAGCCCAGT 2171224
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || ||||| |||||||| || || |||||
Sbjct 2171225 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 2171284
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||||| || | ||||| | ||| | ||||| |||||
Sbjct 2171285 CAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGGCGCACCCTCTCCGACTACAAT 2171344
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| ||||||||||| ||| | ||| | || ||||| || ||||||||
Sbjct 2171345 ATCCAAAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGGGGTGGC 2171392
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || || ||| | || ||| | || ||||| || |
Sbjct 2170937 ATGCAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTTTGGAGGTGGAGCCCAGC 2170996
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || ||||| ||||| |||||||| || || |||||
Sbjct 2170997 GACACCATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAG 2171056
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||||| || | |||||| | || | || || ||||||
Sbjct 2171057 CAGAGGCTGATTTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTGTCTGACTACAAC 2171116
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || || || ||| | ||| | || ||||| || | ||||| ||
Sbjct 2171117 ATTCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGGTAT 2171166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434828045702400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |