Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq9943 95.1 1e-14
seq11381 82.4 7e-11
>seq9943
Length=499256
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
||||||||||| || |||||||| || || || | ||||||||| | |||| || ||
Sbjct 292076 TCGTCTCTGCTGATGAGTTCGTTGGAGAAGGTCAGTCCGGGCATCAGGCCTCGTTTCTTG 292017
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| || || ||||| || || ||||| ||||| || || || || ||||| |||||
Sbjct 292016 AGCCAGAAAATGGCGGCGAAGGATCCAGAGAAGAAGATCCCCTCGACAGCGGCGAACGCC 291957
Query 4692 AC 4693
||
Sbjct 291956 AC 291955
>seq11381
Length=12543884
Score = 82.4 bits (90), Expect = 7e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990
||| || || || || || ||||| ||||| || |||||||| ||||| ||||| || ||
Sbjct 9285421 TACCAAATTCTCATTCACAATACCATCACTAGCAGCAAAAAAGGCCAAGACATGGGAAAT 9285362
Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050
||| | || || |||| || || | |||||| ||||||||||| |||||||||
Sbjct 9285361 AAAATGCTTCTCTTCAGATTTTAGACGGTCCCAGTGTACCAAATCTTTAGATAAATCAAC 9285302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426963098434460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |