Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014 -12-02] 16,620 sequences; 955,752,150 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq12570 114 1e-20 >seq12570 Length=3236859 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||| |||||||| || || || || ||||| || || || || ||||| || ||||| Sbjct 1219274 CATGTTTGTGTACTCCGCCCCAAAGTGTCTCCACTGAAAGCCATAAACCGGCCCAAGGTC 1219333 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 |||||| || | || || || | |||||||| ||||| | ||||| |||||||| Sbjct 1219334 TCCCTCCTCTCGGTCAGTAAACCCACCCTTGTCCAGGAAGTCACGAGAACCATTGGCGTC 1219393 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 ||| ||||| ||||| || | ||||||||||||| || || || || Sbjct 1219394 CCAAATCTTCACCCCTTTTGCAGAGAGCTCTTTGGCATTGGTCGATCC 1219441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369432354007220