Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 682 0.0
seq11714 132 7e-26
seq11381 102 1e-16
>seq9898
Length=4754808
Score = 682 bits (756), Expect = 0.0
Identities = 1339/1965 (68%), Gaps = 27/1965 (1%)
Strand=Plus/Minus
Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118
||||||| || || |||||||||| | || || || | | | || ||||| || |
Sbjct 101371 TATTCTTCATTTCCTCATTCCACAGTCCCCGTTCAGTCAGGTCCTTGAGCAGATGTGGGT 101312
Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178
| || || ||||| ||||| || | ||||| || ||||| || || ||||| || | ||
Sbjct 101311 TTACAATCTGAAACTCTCCGGAGAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTT 101252
Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238
| | || |||||||| || | ||||| || || |||||||| ||||| || |||| ||
Sbjct 101251 CGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGGAAGCAGTAGGCATGGGGGCCAACA 101192
Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298
| | || || || | ||||||| | | || || || || || ||||| ||||| |
Sbjct 101191 ACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGA 101132
Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358
| | | || || ||||| | |||||||| ||||| || ||||| | || |
Sbjct 101131 GCGCAGTCGGCACCTTCTCCCACATGTCGTATTGCAGAATGCCCTTACTCACTGGAGAAC 101072
Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTC 77418
| ||||| |||||||| || ||| |||| |||| || || || || |||| ||
Sbjct 101071 CTGGGTATGTCTCATAAGGCCCGTCTTTTTCTGCTAACTCGCAGCTTGCCTCCAGGGCGG 101012
Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACG 77478
|||| || ||||| || || |||| | || || || |||||| ||| ||||| |
Sbjct 101011 CGTAGTATATTGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCTTCAGGACTTTCAAATG 100952
Query 77479 GATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538
||||| | | ||||| ||||||||||| | ||||| |||||||| || || || || |
Sbjct 100951 GATAACGCATGAGAATGAAGGCATCTGCGAGACCCTGCACTCCAATTCCGATTGGCCTGT 100892
Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598
| | ||| || || | | ||||| || | || || || |||||||| || || || |
Sbjct 100891 GGCGCTTGTTCGAGTTCTCGGCTTCAGGGACTGGGTAGTAGTTAATGTCAATGATCTTGT 100832
Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT 77658
|||| ||||| |||| ||||||| || || || || ||||| | | |
Sbjct 100831 TGAGGTTTCTTACAATTACTTTAGTGACAGAGGCAAGCTTTTTGAAGTCAAAGGTCCGTT 100772
Query 77659 CTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715
|| ||||| ||||||| | ||| ||||| || | ||||| || ||||||||||
Sbjct 100771 CTGGAGTAACATACATGTTAAGAGCAATAGAAGCCAAGTTACAGACGGCTACCTCATCTT 100712
Query 77716 CGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775
| | | ||| | | ||||| || || | ||||| |||||||||||||||| ||| |
Sbjct 100711 TGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATAGTGCCCAAATTCT 100652
Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835
| || || ||||| | || || | || || || | || | ||||| || ||||||
Sbjct 100651 GCTGATTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGAGTTCCTGTTTCAG 100592
Query 77836 TCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTATC- 77892
|||| || || || || | | ||| || || || ||| || | || ||| ||
Sbjct 100591 TCTGAGACTCTATGATGGCATACCACAC--CTGCTGAGCCTTGACCACCCGTTTCACTCT 100534
Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952
|||| || | | || |||| || ||| ||||| || || |||||| |||||||
Sbjct 100533 GCCTTCCTGCT-CGTAGCGAGTGTACAGCTTCTCAAACTCCTCCCCCCAACACTCATCCA 100475
Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCA 78012
|||||||| ||| | ||||||||||| |||||||| | | | || | ||||
Sbjct 100474 GCCCAGGGCACTCACTGGGGCACATCAAAGACCAGTCCTGGTTGTTTTCCACCCTCTTCA 100415
Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072
| || | |||||| |||||||| ||| || || ||||| | || || || || || |
Sbjct 100414 TGAACAAATCAGGGATCCATAGGGCATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTAC 100355
Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132
| || ||||| || | || || || || | | ||| | |||||||| || || || |
Sbjct 100354 CAGTGTTCTTCTTTAACTCAAGGAAGTCAAACACGTCAAAGTGCCATGGCTCAAGGTACA 100295
Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192
| || | | |||||||||||||| || || || || | || | || ||||| || |
Sbjct 100294 TGGCAAAGGCACCAGGTCGTTTATTGCCACCTTGGTCCACGTAGCGCGCCGTGTTGTTGT 100235
Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252
| || |||| |||||| | || || || || | ||||||||||||| ||| || ||||
Sbjct 100234 ACACCCTCAGCATTGGCACAAGGCCATTTGAATTACCATTTGTTCCAGCAATGTAGCTTC 100175
Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312
| ||| | ||| |||| | || || || |||||||| || || || ||||
Sbjct 100174 CTGTTGATCTAATGCAGCTAACTGCTACACCAATCCCTCCTGCAGATTTGGAGATGAGAG 100115
Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372
|||| |||| | |||||| || || || || || ||||||||| ||||| || || |
Sbjct 100114 CGCATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGA 100055
Query 78373 AACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428
| || ||||| | || || || || |||||||| || | || ||||| |||
Sbjct 100054 AGCAACTAGAGAGCTGTGGTCTGTTG----GTGCCTGCATTGAACAGAGTGGGAGAGGCA 99999
Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488
|| || ||||| || ||||| || || ||||| || ||||| |||| || || || |
Sbjct 99998 TGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCAATATCAGTT 99939
Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548
| || ||||| || ||||| | ||| | ||| ||||| || | ||| || ||| |
Sbjct 99938 TTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGACGCTCAGCCACCTTGCCA 99879
Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608
|| ||||||| || ||| || || | || ||||| ||||| | || || |||||
Sbjct 99878 TTGATTTTCAGCAGGTAGGAGCGCTCTAGGGTCTTAAAGCCAAAGAAATTATAAGAAAAA 99819
Query 78609 TCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTA--ACAATATCCA 78666
|| || || || || ||| |||| || || |||||| |||| | |||||||| |
Sbjct 99818 TCCCTATCATAGATTATAGCAGAGTTGAGGCGGTCTTTG--TTTGCAAGGACAATATCTA 99761
Query 78667 -TGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTT--AGGATTAACATAGTTAA 78723
| | | | || || || || || || | | ||| ||| || |||||||| |
Sbjct 99760 GGGTCTCTTG-GGAGATCATGGGGGA--GTGGCGCTTGTTTAAAGGGTTGACATAGTTGA 99704
Query 78724 ATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAG 78783
| | ||| ||||| || ||||| || | || || || || || || || || || ||||
Sbjct 99703 ACAGATCCTCCATGACGTCACTGAACACCTTCTTGGTCTCTTTATGGAGGTTGGAAACAG 99644
Query 78784 CTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTT 78843
| || | |||||| |||| |||||||| || || | || || ||||| || || |
Sbjct 99643 CAATGCGTGCAGCCAGAAGGGCATAATCGGGGTGCTTAGTGGTTAGTGTGGCAGCAATCT 99584
Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTT 78903
| || || | | || ||||| | ||| || || ||| | || || ||||| || || |
Sbjct 99583 CCGCAGCGAGTGTGTCCAACTCCACAGTGGTCACTCCACTGTACAGACCTTGGATCACCT 99524
Query 78904 TCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAA 78963
|||| | ||||| | || || |||||||| | ||| | || ||||| | ||| |
Sbjct 99523 TCATTGTGATTTGTGCGGGGTCCACAAACTCCGCGTTGAGCCCGTAACAGAGCTTTTGGA 99464
Query 78964 TACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008
| ||||| |||||||||||||| || || ||||| || |||||
Sbjct 99463 TTCGAGAGGTGATTTTATCAAACATGACGCGCTCCTGGCGTCCAT 99419
Score = 93.3 bits (102), Expect = 6e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908
|||| || || || |||||||| |||| |||| ||| | || || || ||||||||||
Sbjct 101662 TCCAGCCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 101603
Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968
| | ||||| || || || ||| | || || | || || ||||| || | || ||||
Sbjct 101602 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGGTCTGCAGCCATCTTGAGTATAGTCT 101543
Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 77017
| || | |||||||||| ||||| | | ||||| | |||||||||
Sbjct 101542 TCTGTGATATTTCCCAAACTGTTTTATACAGCTGTTTTAAATCATCTGG 101494
>seq11714
Length=3826745
Score = 132 bits (146), Expect = 7e-26
Identities = 150/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398
||| || ||| || || ||| ||||| |||||||||||| || ||||||||||
Sbjct 1501499 TCCTTTGCTAACAGGAGAGCCAGCATATGATTCATAAGGTCCATCATGGGCAGCTAGTTC 1501558
Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458
|||||| || ||||| || | ||||| || || || ||||||| | ||||||| ||
Sbjct 1501559 ACAACTGGCCTCCAAAGCAGCATAATATATGGTCTCAAAAATCTGGATGTTGAGATGCTG 1501618
Query 77459 TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518
||||| ||| ||||| |||||| | | ||||| ||||| ||||| | ||||||||
Sbjct 1501619 GGCTTCTTCACTTTCAAATGGATAACGCATGAGAATGAAGGCGTCTGCAAGACCCTGAAC 1501678
Query 77519 TCCAATACCAATAGGTCTATG 77539
|| || ||||||||||| ||
Sbjct 1501679 ACCGATTCCAATAGGTCTGTG 1501699
Score = 102 bits (112), Expect = 1e-16
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908
|||| || ||||| ||||||||||| |||||| ||| | || || || || ||||| |
Sbjct 1500384 TCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATGTGAATGT 1500443
Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968
||| || || || || || ||| | || || | ||||||||||| || | | | |
Sbjct 1500444 TCAGAGATTGGCTCTGGTCAATGTAGGCACCACGGTCAGCCGCCATCTTGAGGACCATTT 1500503
Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
| |||| |||||||| | ||||||| ||| || || | |||||||||||
Sbjct 1500504 TCTGAGAGATTTCCCACACAGTTTTGTAAAGCTGCTTTAGATCATCTGGAA 1500554
>seq11381
Length=12543884
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| || || | ||| || ||| | || |||||||||||||| || | |||||
Sbjct 9286988 TCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGACCGGGCATTAGACCCCTCTTTTTC 9286929
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
|||||| | || ||||| || |||||||| ||||| || || ||||| || ||||||||
Sbjct 9286928 AGCCAATAAATGGCCGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATGC 9286870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694524482556800
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