Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq9898 659 0.0
seq11714 123 4e-23
>seq9898
Length=4754808
Score = 659 bits (730), Expect = 0.0
Identities = 1336/1967 (68%), Gaps = 31/1967 (2%)
Strand=Plus/Minus
Query 75654 TATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGAT 75713
||||||| || || |||||||||| | | || || | | | || ||||| || |
Sbjct 101371 TATTCTTCATTTCCTCATTCCACAGTCCCCGTTCAGTCAGGTCCTTGAGCAGATGTGGGT 101312
Query 75714 TAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTT 75773
| ||||| ||||| ||||| || | ||||| || ||||| || || ||||| || | ||
Sbjct 101311 TTACAATCTGAAACTCTCCGGAGAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTT 101252
Query 75774 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833
| | || |||||||| || | ||||| || || |||||||| ||||| || |||| ||
Sbjct 101251 CGATGGACTCATTGTTGCCTAGTATTTGTGCTGTGGAAGCAGTAGGCATGGGGGCCAACA 101192
Query 75834 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 75893
| | || || || | ||||||| | | || || || || || ||||| ||||| |
Sbjct 101191 ACAGGCTGTTCCTCACACCATGTTTAGTAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGA 101132
Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953
| | | || || ||||| | |||||||| ||||| || || || | || |
Sbjct 101131 GCGCAGTCGGCACCTTCTCCCACATGTCGTATTGCAGAATGCCCTTACTCACTGGAGAAC 101072
Query 75954 CATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCAC 76013
| ||||| || |||| |||||| ||||| |||| ||||| || ||||| | ||
Sbjct 101071 CTGGGTATGTCTCATAAGGCCCGTCTTTTTCTGCTAACTCGCAGCTTGCCTCCAGGGCGG 101012
Query 76014 CGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG 76073
|||| || ||||| || || |||| | || || || |||||| |||| ||||| |
Sbjct 101011 CGTAGTATATTGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCTTCAGGACTTTCAAATG 100952
Query 76074 GATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTAT 76133
||||| | | ||||| || |||||||| || ||||| |||||||| || || || || |
Sbjct 100951 GATAACGCATGAGAATGAAGGCATCTGCGAGACCCTGCACTCCAATTCCGATTGGCCTGT 100892
Query 76134 GTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTAT 76193
| | ||| || || | || ||||| || | ||||| || ||||| || || || || |
Sbjct 100891 GGCGCTTGTTCGAGTTCTCGGCTTCAGGGACTGGGTAGTAGTTAATGTCAATGATCTTGT 100832
Query 76194 TGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCAT 76253
|||| ||||| |||| ||||||| || || || || ||||| | | |
Sbjct 100831 TGAGGTTTCTTACAATTACTTTAGTGACAGAGGCAAGCTTTTTGAAGTCAAAGGTCCGTT 100772
Query 76254 CTA---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT--T 76308
|| | ||| |||| |||||||| ||||| || | ||||| ||||||||||||| |
Sbjct 100771 CTGGAGTAACATACATGTTAAGAGCAATAGAAGCCAAGTTACAGACGGCTACCTCATCTT 100712
Query 76309 AGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATT 76368
|| | | ||| | | ||||| ||||| | ||||| || |||||||| || | |||
Sbjct 100711 TGCTT--GTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATAGTGCCCAAATT 100654
Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428
|| || || ||||| ||||||| | || || || | | | |||||||| |||||
Sbjct 100653 CTGCTGATTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGAGTTCCTGTTTC 100594
Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATTATAGATTTGTAT 76486
| |||| || || || || | | ||| || || || ||| || | | ||| |
Sbjct 100593 AGTCTGAGACTCTATGATGGCATACCACAC--CTGCTGAGCCTTGACCACCCGTTTCACT 100536
Query 76487 C-GCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATC 76545
| || | || | | || | || || | | ||||| || || |||||| |||||
Sbjct 100535 CTGCCTTCCTGCT-CGTAGCGAGTGTACAGCTTCTCAAACTCCTCCCCCCAACACTCATC 100477
Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605
|| ||||| || ||| | || |||||||| ||||| || | | | |||| ||
Sbjct 100476 CAGCCCAGGGCACTCACTGGGGCACATCAAAGACCAGTCCTGGTTGTTTTCCACCCTCTT 100417
Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665
||| || | |||||| |||||||| ||| || || ||||| | || | || || ||
Sbjct 100416 CATGAACAAATCAGGGATCCATAGGGCATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTT 100357
Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725
|| || ||||| || | || ||||| || | | ||| | |||||||| || || ||
Sbjct 100356 ACCAGTGTTCTTCTTTAACTCAAGGAAGTCAAACACGTCAAAGTGCCATGGCTCAAGGTA 100297
Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785
|| || | |||| ||||||||||| || || || || | || | || ||||| ||
Sbjct 100296 CATGGCAAAGGCACCAGGTCGTTTATTGCCACCTTGGTCCACGTAGCGCGCCGTGTTGTT 100237
Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845
|| || |||| |||||| | || ||| || || ||||||||||||||| ||| || ||
Sbjct 100236 GTACACCCTCAGCATTGGCACAAGGCCATTTGAATTACCATTTGTTCCAGCAATGTAGCT 100177
Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905
||| || | ||| |||| | || || || |||||||| ||| ||||| ||
Sbjct 100176 TCCTGTTGATCTAATGCAGCTAACTGCTACACCAATCCCTCCTGCAGATTTGGAGATGAG 100117
Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965
||| || |||| | ||| ||||| ||||| || || || |||||| ||||| || ||
Sbjct 100116 AGCGCATTGTTTGAGTGTATCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAG 100057
Query 76966 AAAACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATG 77021
|| || ||||| | || || || || |||||||| |||| || ||||| |
Sbjct 100056 GAAGCAACTAGAGAGCTGTGGTCTGTTG----GTGCCTGCATTGAACAGAGTGGGAGAGG 100001
Query 77022 CATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCC 77081
||||||||||||| || ||||| || || ||||| || ||||| |||| || |||||
Sbjct 100000 CATGAGTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCAATATCAG 99941
Query 77082 ATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTAT 77141
|| || ||||| ||||| || | ||| | ||| ||||| || || || | |||
Sbjct 99940 TTTTGTGGATTCCAACAGCTACTCTCATGAGCATGTGCTGTGGACGCTCAGCCACCTTGC 99881
Query 77142 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 77201
||| ||||||| || ||| || || | || ||||| ||||| | || || ||||
Sbjct 99880 CATTGATTTTCAGCAGGTAGGAGCGCTCTAGGGTCTTAAAGCCAAAGAAATTATAAGAAA 99821
Query 77202 AGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTA--ACAATATC 77259
| || || || || || ||| | || || || ||| | | |||| | ||||||||
Sbjct 99820 AATCCCTATCATAGATTATAGCAGAGTTGAGGCGGTC--TTTGTTTGCAAGGACAATATC 99763
Query 77260 CA-TGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTT--AGGATTAACATAGTT 77316
| | | | | || || || || || || | | ||| ||| || ||||||||
Sbjct 99762 TAGGGTCTCTTG-GGAGATCATGGGGGA--GTGGCGCTTGTTTAAAGGGTTGACATAGTT 99706
Query 77317 AAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATAC 77376
|| | || ||||| ||||| || || | || || || || || || || || || ||
Sbjct 99705 GAACAGATCCTCCATGACGTCACTGAACACCTTCTTGGTCTCTTTATGGAGGTTGGAAAC 99646
Query 77377 GGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTAT 77436
|| || | ||||| |||| ||||| || || || | || || ||||| || ||
Sbjct 99645 AGCAATGCGTGCAGCCAGAAGGGCATAATCGGGGTGCTTAGTGGTTAGTGTGGCAGCAAT 99586
Query 77437 TTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAAC 77496
|| || || | || || || || | ||| || ||||| | || || ||||| || ||
Sbjct 99585 CTCCGCAGCGAGTGTGTCCAACTCCACAGTGGTCACTCCACTGTACAGACCTTGGATCAC 99526
Query 77497 TTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT 77556
||||| | |||| || || |||||||| | ||| | || ||||| | |||
Sbjct 99525 CTTCATTGTGATTTGTGCGGGGTCCACAAACTCCGCGTTGAGCCCGTAACAGAGCTTTTG 99466
Query 77557 AATACGAGATGTGATTTTATCAAACATGACATTCTCCTTACATCCAT 77603
|| ||||| |||||||||||||||||||| ||||| | |||||
Sbjct 99465 GATTCGAGAGGTGATTTTATCAAACATGACGCGCTCCTGGCGTCCAT 99419
Score = 89.7 bits (98), Expect = 7e-13
Identities = 126/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503
|||| || || || |||||||| || | |||| ||| | || || || ||||||||||
Sbjct 101662 TCCAGCCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 101603
Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563
| | ||||| || || || ||| | || || | || || ||||| || | || ||||
Sbjct 101602 TTAGAGACTGGCTCTGGTCAATGTAGGCACCGCGGTCTGCAGCCATCTTGAGTATAGTCT 101543
Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTT 75619
| || | |||||||||| ||||| | | ||||| | ||||||||| |||||
Sbjct 101542 TCTGTGATATTTCCCAAACTGTTTTATACAGCTGTTTTAAATCATCTGG--GATTT 101489
>seq11714
Length=3826745
Score = 123 bits (136), Expect = 4e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993
||| |||||| || || ||| ||||| ||| |||| || || | ||||||||||
Sbjct 1501499 TCCTTTGCTAACAGGAGAGCCAGCATATGATTCATAAGGTCCATCATGGGCAGCTAGTTC 1501558
Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053
||||| ||||| || ||| | ||||| || || || ||||||| | || |||| ||
Sbjct 1501559 ACAACTGGCCTCCAAAGCAGCATAATATATGGTCTCAAAAATCTGGATGTTGAGATGCTG 1501618
Query 76054 CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAAC 76113
||||| ||| ||||| |||||| | | ||||| || || ||||| || ||||||||
Sbjct 1501619 GGCTTCTTCACTTTCAAATGGATAACGCATGAGAATGAAGGCGTCTGCAAGACCCTGAAC 1501678
Query 76114 TCCAATACCAATAGGTCTATG 76134
|| || ||||||||||| ||
Sbjct 1501679 ACCGATTCCAATAGGTCTGTG 1501699
Score = 102 bits (112), Expect = 1e-16
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503
|||| || ||||| ||||||||||| |||||| ||| | || || || || ||||| |
Sbjct 1500384 TCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATGTGAATGT 1500443
Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563
||| || || || || || ||| | || || | ||||||||||| || | | | |
Sbjct 1500444 TCAGAGATTGGCTCTGGTCAATGTAGGCACCACGGTCAGCCGCCATCTTGAGGACCATTT 1500503
Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614
| |||| |||||||| | ||||||| ||| || || | |||||||||||
Sbjct 1500504 TCTGAGAGATTTCCCACACAGTTTTGTAAAGCTGCTTTAGATCATCTGGAA 1500554
Score = 96.9 bits (106), Expect = 5e-15
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053
|| || ||||| |||| |||||| || || ||||| |||||||| || || || || |||
Sbjct 1503114 GTGCCAGCATTGAACAGTGTAGGGGAGGCGTGAGTAAACCATTTCTCTGAGAGCAGGTTG 1503173
Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113
|| || ||||| |||| || | ||| || |||||| || ||||| || | ||| | |
Sbjct 1503174 TAGGTCTCAATGGCTGCGTCCACATCTTGTTTATGAATCCCAACAGCCACTCTCATGAGC 1503233
Query 77114 ATATGCTGAGG 77124
|||||||||||
Sbjct 1503234 ATATGCTGAGG 1503244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712786287878400
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