Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 116 9e-21
>seq10290
Length=4455921
Score = 116 bits (128), Expect = 9e-21
Identities = 161/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| | |||||||| || ||||| ||||||||||| |||| | ||
Sbjct 2173076 CTGAGGCGCAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTA 2173017
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||| || || || || || || |||||||| || || || | | || |||
Sbjct 2173016 CGCCCATCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGGGGAATGCCT 2172957
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| || ||||| || ||| || | || | | |||| ||| ||| || |||
Sbjct 2172956 TCCTTGTCCTGAATCTTAGCTTTCACGTTTTCAATGGTGTC---ACTGGGCTCAACCTCA 2172900
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||||||||| ||||| ||||| || |||| |||||
Sbjct 2172899 AGGGTAATAGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2172856
Score = 114 bits (126), Expect = 3e-20
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||||||||| || || ||||| |||||||| ||||| |||| | || | |||||||
Sbjct 2171376 AGGACAAGATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGAGAGGGTGCGCCCATCT 2171317
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| | ||||||||| || | | || |||||||| ||
Sbjct 2171316 TCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 2171257
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || || |||| | | |||| ||| ||| || || ||||| ||
Sbjct 2171256 TGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGAGTGATG 2171200
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || ||||| |||| ||||||
Sbjct 2171199 GTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2171165
Score = 109 bits (120), Expect = 1e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||||||||| || || || ||||| ||||||||||| || | | || | |||||
Sbjct 2170920 AGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCC 2170861
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| | ||||||||| || | | || |||||||| ||
Sbjct 2170860 TCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 2170801
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || ||| | || | |||| ||| || ||||| || || |||
Sbjct 2170800 TGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTT 2170741
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| ||||| || ||||| |||| |||||| ||
Sbjct 2170740 TTGCCAGTGAGGGTTTTCACAAAGATCTGCATATT 2170706
Score = 107 bits (118), Expect = 4e-18
Identities = 162/227 (71%), Gaps = 10/227 (4%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | || ||||||||||| || || ||||| ||||||||||| || | | |||
Sbjct 2173305 CCTGAGACGAAGAACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGT 2173246
Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000
| || ||||| || ||||| || || ||||| | ||||||||| || | | ||
Sbjct 2173245 ACGGCCGTCTTCGAGCTGCTTT--CCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATG 2173188
Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACT 152057
|||||||| || || || || || || |||| | | |||| ||| ||| ||
Sbjct 2173187 CCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACC 2173131
Query 152058 TCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || || || ||||| || ||||| |||| ||||||
Sbjct 2173130 TCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2173084
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||||||||| || || || ||||| || |||||||| || | | ||| | || |||
Sbjct 2171148 AGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCGTCT 2171089
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| || || ||||||||||| || | | || |||||||| ||
Sbjct 2171088 TCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 2171029
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || ||| |||| | | |||| ||| || || | ||| || ||
Sbjct 2171028 TGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATGGTC 2170969
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || ||||| |||| ||||||
Sbjct 2170968 TTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153575101072020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |