Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 107 2e-18
>seq10290
Length=4455921
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||| |||||||| || | ||||||||||| |||||| | || || |||||
Sbjct 2172856 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAAACTATTACCCTTGAGGTTGAGCCCAGT 2172915
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | || ||| || ||| ||||| |||||| ||||| ||||||
Sbjct 2172916 GACACCATTGAAAACGTGAAAGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAA 2172975
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||||||||||| ||| ||||| || | || ||| || | |||| || ||
Sbjct 2172976 CAAAGGCTTATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACCCTCTCCGACTACAAC 2173035
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| || |||||||| || || || ||||| |||| || | |||||
Sbjct 2173036 ATCCAGAAAGAATCCACTCTTCACTTAGTCCTGCGCCTCAGAGGTGG 2173082
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156
|| ||||| || ||||| ||||| | || ||||||||||| ||| | || ||| |||
Sbjct 2170706 AATATGCAGATCTTTGTGAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTGGAGCCC 2170765
Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216
||||| | ||| | || || || ||| ||||| |||||| ||||| |||
Sbjct 2170766 AGCGACACGATTGAAAATGTTAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGAT 2170825
Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276
|| || ||| | || | ||| ||||| || | || ||| || | | || ||
Sbjct 2170826 CAGCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCTGACTAC 2170885
Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| || || |||||||| || || ||| | || |||||||| | |||||
Sbjct 2170886 AACATCCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGG 2170935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421725759505120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |