Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 156 3e-33
>seq10290
Length=4455921
Score = 156 bits (172), Expect = 3e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || || || || || ||| |||||||||||| ||||| |||| |
Sbjct 2171391 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGAG 2171332
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| |||| | || || |||||||| |||||||||||||| | ||||||||||| ||
Sbjct 2171331 AGGGTGCGCCCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 2171272
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| |||||||| ||| ||||| |||| | |||| | |||||||| || |||||
Sbjct 2171271 ATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCGATGGTGTCACTGGGCTCCAC 2171213
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || ||||| || |||||||| ||||| ||||| |||||
Sbjct 2171212 CTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2171165
Score = 132 bits (146), Expect = 3e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | || || || || || ||| || || ||||||||||| ||
Sbjct 2170939 CATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTC 2170880
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || || |||||||| |||||||||||||| | |||||||||||
Sbjct 2170879 AGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGG 2170820
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | || | || |||||| || ||
Sbjct 2170819 GGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTAACATTTTCAATCGTGTCGCTGGGCTC 2170760
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | || || || || || |||||||| ||||| ||||| |||||
Sbjct 2170759 CACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170709
Score = 132 bits (146), Expect = 3e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | || || || || || ||| || || || |||||||| ||
Sbjct 2171167 CATACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGAATGTTGTAGTC 2171108
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| || |||||||| |||||||| |||| | |||||||||||
Sbjct 2171107 AGACAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAAATCAGCCTCTGCTGATCTGG 2171048
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||||| | | ||||||||| || ||
Sbjct 2171047 GGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTC 2170988
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| || || ||||| || |||||||| ||||| ||||| |||||
Sbjct 2170987 CACCTCCAAAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 2170937
Score = 129 bits (142), Expect = 4e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| ||| || || ||||||||||| || | || || |||| ||
Sbjct 2173292 ACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCTTCG 2173233
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || ||||||||||| | ||||||||||| || | |||||||| |||
Sbjct 2173232 AGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 2173173
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| |||| | |||| | |||||||| || |||||||||| || || |||||
Sbjct 2173172 ATCTTGGCCTTC-ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTT 2173114
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| ||||| ||||| |||||
Sbjct 2173113 CCCAGTGAGGGTTTTCACAAAGATCTGCAT 2173084
Score = 122 bits (134), Expect = 6e-23
Identities = 168/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | || || | |||||| ||| || || ||||||||||| ||
Sbjct 2173086 CATACCACCTCTGAGGCGCAGGACTAAGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTC 2173027
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || || |||||||| || ||||| || | | || |||||||
Sbjct 2173026 GGAGAGGGTACGCCCATCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGG 2172967
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| |||| || | |||||||| || ||
Sbjct 2172966 GGGAATGCCTTCCTTGTCCTGAATCTTAGCTTTCACGTTTTCAATGGTGTCACTGGGCTC 2172907
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||||| | ||||| || || || ||||||||||| || |||||||||||||||
Sbjct 2172906 AACCTCAAGGGTAATAGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCATGATG 2172852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359917481694540
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