Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Boleophthalmus_20pectinirostris_20[refseq_20GCF_5F000788275.1_202014
-12-02] 16,620 sequences; 955,752,150 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq10290 152 1e-31
>seq10290
Length=4455921
Score = 152 bits (168), Expect = 1e-31
Identities = 167/220 (76%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || |||||||| ||||| || || || ||||| || |||||||| || |||
Sbjct 2173087 CAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGGAGGTGGA--GCCCAGTG 2173144
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||||||||||||||| || ||||| |||||||| ||||| || || || || ||||
Sbjct 2173145 ACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAGC 2173204
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| || ||||| ||||||||||| || | ||||| | || || |||
Sbjct 2173205 AGAGGTTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGTACTCTGTCTGACTACAACA 2173264
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| |||||||| || || ||||||||| | | |||||
Sbjct 2173265 TCCAGAAAGAATCCACCCTTCATCTTGTTCTTCGTCTCAG 2173304
Score = 140 bits (154), Expect = 8e-28
Identities = 157/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || |||||||| ||||| || || || ||||| || |||||||| || |||
Sbjct 2171168 CAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTCTGGAGGTGGA--GCCCAGTG 2171225
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||||||||||||||| || ||||| |||||||| ||||| || || || || ||||
Sbjct 2171226 ACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAGC 2171285
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| || ||||| |||||||| | || || |||| || ||
Sbjct 2171286 AGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGATGGGCGCACCCTCTCCGACTACAATA 2171345
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
||||||| || || || || ||||||||
Sbjct 2171346 TCCAAAAGGAGTCCACCCTCCATCTTGT 2171373
Score = 136 bits (150), Expect = 1e-26
Identities = 164/221 (74%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || |||||||| ||||| || ||||| |||||||| |||||||| || |||
Sbjct 2170712 CAGATCTTTGTGAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTGGA--GCCCAGCG 2170769
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||| || || || || || |||||||||||||| ||||| || || || || ||||
Sbjct 2170770 ACACGATTGAAAATGTTAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAGC 2170829
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| || ||||| || ||||| | || || | || || |||
Sbjct 2170830 AGAGGTTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCTGACTACAACA 2170889
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| |||||||| || || |||||||| || | || |||
Sbjct 2170890 TCCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTGAGA 2170930
Score = 136 bits (150), Expect = 1e-26
Identities = 164/221 (74%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || |||||||| ||||| || || || ||||| | |||||||| || |||
Sbjct 2170940 CAGATCTTTGTGAAAACCCTCACTGGGAAGACCATCACTTTGGAGGTGGA--GCCCAGCG 2170997
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| || || |||||||||||||| ||||| || || || || ||||
Sbjct 2170998 ACACCATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAGC 2171057
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || || || ||||| || ||||||||||| || | ||||| | || || |||
Sbjct 2171058 AGAGGCTGATTTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTGTCTGACTACAACA 2171117
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
| || |||||||| || || |||||||| || | || |||
Sbjct 2171118 TTCAGAAAGAATCCACCCTCCATCTTGTCCTGCGTCTGAGA 2171158
Score = 132 bits (146), Expect = 1e-25
Identities = 163/221 (74%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
||||| || || || || ||||| || ||||| || ||||| ||||| || || |||
Sbjct 2172859 CAAATCTTTGTCAAGACCCTCACCGGCAAAACTATTACCCTTGAGGTTGA--GCCCAGTG 2172916
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| || ||||| ||| |||||||||||||| ||||| || || || || || |
Sbjct 2172917 ACACCATTGAAAACGTGAAAGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGATCAAC 2172976
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
|| | ||||| || || || || ||||| || ||||| | || || |||| || |||
Sbjct 2172977 AAAGGCTTATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACCCTCTCCGACTACAACA 2173036
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| |||||||| || || || | || || | ||||||
Sbjct 2173037 TCCAGAAAGAATCCACTCTTCACTTAGTCCTGCGCCTCAGA 2173077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203474872964280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |