Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clupea_20harengus_20[refseq_20GCF_5F000966335.1_202015-03-30] 6,915 sequences; 807,711,962 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1943 86.0 7e-12 >seq1943 Length=432286 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||||||||||| | |||| ||||| || | ||| ||||| || ||| Sbjct 424979 TAGATGTTGCTTGTGTATGGCTCAATGGACTCGTTGTTTCCTAGGATCTGGGCTGTAGAG 424920 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 || |||||||| || |||| || |||||||| Sbjct 424919 GCGGTGGGCATTGGGGCCAGAAGCAGGCTGTT 424888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597301966248200