Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clupea_20harengus_20[refseq_20GCF_5F000966335.1_202015-03-30] 6,915 sequences; 807,711,962 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq4946 188 5e-42 seq2999 188 5e-42 seq3207 172 4e-37 seq978 113 3e-19 >seq4946 Length=1076177 Score = 188 bits (208), Expect = 5e-42 Identities = 931/1472 (63%), Gaps = 10/1472 (1%) Strand=Plus/Minus Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308 ||| || || || | |||||| || || ||||||||||| | ||||| || || ||||| Sbjct 1532 TTTGTCTGCAGCTGACACATTGAGGATTCCATTGGCATCAATGTCAAAGGTCACCTCAAT 1473 Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368 |||||||| | | | || ||||| |||||| || | ||| | |||| | || Sbjct 1472 CTGAGGGACACTGCGTGGGGCCGGTGGAATCCCTGTCAGCTCAAACTTGCCCAAAAGGTT 1413 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 || || || || | || ||| ||||| | | ||||| || | | || || Sbjct 1412 GTTGTCCTTGGTCATGGCTCTTTCTCCCTCATACACCTGGATCAGGACCCCGGGCTGGTT 1353 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAA 517487 ||||| || || || || ||||| | | ||| || || || ||||| | | | Sbjct 1352 GTCTGAGTAGGTGGTGAAGG-TCTGGGTCTGTTTGGTGGGGATGGTGGTGTTGCGCTTGA 1294 Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547 | | ||||| | ||| || || || || | || ||||| || || | ||||| | Sbjct 1293 TGAGGGCAGTCATGACACCTCCAGCCGTCTCAATGCCCAGAGACAGGGGGGCCACATCCA 1234 Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607 || | | | || | || ||| | | ||| | ||||| || || |||| | Sbjct 1233 GCAGCAGTAGGTCCTGGACGTTCTCAGACTTGTCACCCATGAGAATGGCAGCCTGAACTG 1174 Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667 |||||||||| || || || || ||||| || | | || || | | ||||||| Sbjct 1173 CAGCACCATAGGCCACTGCCTCGTCAGGGTTGATGCCCTTGTTCAGGTCCCTTCCATTGA 1114 Query 517668 AAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726 | |||| || | | ||| | ||||| || | | || ||||| || || ||| Sbjct 1113 AGAAATCCTGCAGCTGCT-TCTGGATTTTAGGGATTCTGGTGGAACCTCCCACCAAGACA 1055 Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786 || ||||| | ||||| || |||| || | ||| | |||| || || || ||| Sbjct 1054 ATGTCATGGATCTGTGCCTTGTCCAACTTGGCATCTCTCAGGGCTTTCTCCACAGGCTCA 995 Query 517787 AGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 517846 || | || || | ||| || | || || || |||||| || | | | Sbjct 994 AGGGTTCCCCTGAAGAGGTCGGAGTTCATCTCCTCAAAGCGAGCTCTGGTGATGGAGGTG 935 Query 517847 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 517906 | ||||||| || || | | ||| || | |||||| | | || | || || Sbjct 934 TAGAAATCAATGCCCTCATAAAGAGAGTCGATTTCAATGCTGGCCTGGGAGCTGGAGGAC 875 Query 517907 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC--TTTTGCTGATT 517964 |||| | || || | ||||||||||| | || || | | || | ||| | | Sbjct 874 AGTGTCCTCTTGGCCCTCTCACATGCTGTGCGCAGCCTCCTCAGTGCCCTCTTGTTC--T 817 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 518024 | | | ||| | ||| |||| |||||||| || || ||| | | || | |||| Sbjct 816 GGCTAATGTCTTTCTTAAATTTCCTCTTGAACTCCTCCACAAAGTGATTCACCATGCGAT 757 Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 ||||||| ||||| || |||| | ||| | ||| | || ||| | || | || | | Sbjct 756 TATCAAAGTCTTCCCCACCCAGGTGAGTGTCTCCAGCAGTGGCTTTGACCTCAAAGATGC 697 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 ||||||||| | | | || |||||| || |||||||| | ||||| || || | Sbjct 696 CATCTTCAATGGTTAGGATAGAAACATCAAAAGTACCACCACCTAGGTCAAAGATGAGGA 637 Query 518145 CATT-CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 |||| | | ||| | | ||| || || ||||| |||| || || || || || Sbjct 636 CATTACGCTCACCGGTCGT-GCCTTTGTCCAGTCCATAAGCAATGGCTGCTGCCGTGGGC 578 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 || || || || |||| ||||| || ||||| || || || || || ||||| || Sbjct 577 TCGTTGATGATCCTCAGCACATTCAGTCCAGCGATCACGCCAGCGTCCTTGGTGGCCTGG 518 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | || || || || || || |||||||| || || || |||| ||||||| | || Sbjct 517 CGCTGGGAGTCATTGAAGTAAGCAGGAACGGTGATGACTGCATTGGTTACTTTCTGTCCC 458 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 || || || || | | ||||| || | | ||| || || |||| ||||||| Sbjct 457 ATGTAGGCCTCAGCAATCTCCTTCATCTTGACCAGGACCATGGAGGAGATTTCTTCTGGG 398 Query 518384 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 | || ||| ||| || || |||| || | || || ||| || | Sbjct 397 TTAAATGTTTTGTTCTCACCTTTGTACTCCACTTGAACTTTGGGCTTTCCCCCATCACTG 338 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 || ||| | || ||||||| ||||| || || |||||| |||| ||| | || Sbjct 337 ATGACTGTGAAGGGCCAGTGCTTCATGTCAGACTGAACAACGGAATCATCAAACTTTCGT 278 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | || || |||||||| | || ||| | || || || || | |||| ||| Sbjct 277 CCAATGAGACGCTTGGCATCAAAGACGGTGTTGTTGGGGTTCATGGCCACCTGATTTTTT 218 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||| |||||||| ||||| ||||| || | ||||| || || || | Sbjct 217 GCAGCATCACCAATCAGCCTCTCTGTGTCTGTGAAGGCCACATAACTCGGGGTGGTTCTG 158 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || || || || || ||||| || || ||||| |||| || | || || || || Sbjct 157 TTGCCCTGGTCGTTGGCAATGATCTCCACTTTTCCATGCTGGAACACCCCAACGCAGGAG 98 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGCAAT 518715 | || || || | ||||||||||| | ||| Sbjct 97 TAGGTGGTACCCAGGTCAATACCAATGGAAAT 66 >seq2999 Length=180986 Score = 188 bits (208), Expect = 5e-42 Identities = 931/1472 (63%), Gaps = 10/1472 (1%) Strand=Plus/Minus Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308 ||| || || || | |||||| || || ||||||||||| | ||||| || || ||||| Sbjct 166663 TTTGTCTGCAGCTGACACATTGAGGATTCCATTGGCATCAATGTCAAAGGTCACCTCAAT 166604 Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368 |||||||| | | | || ||||| |||||| || | ||| | |||| | || Sbjct 166603 CTGAGGGACACTGCGTGGGGCCGGTGGAATCCCTGTCAGCTCAAACTTGCCCAAAAGGTT 166544 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 || || || || | || ||| ||||| | | ||||| || | | || || Sbjct 166543 GTTGTCCTTGGTCATGGCTCTTTCTCCCTCATACACCTGGATCAGGACCCCGGGCTGGTT 166484 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAA 517487 ||||| || || || || ||||| | | ||| || || || ||||| | | | Sbjct 166483 GTCTGAGTAGGTGGTGAAGG-TCTGGGTCTGTTTGGTGGGGATGGTGGTGTTGCGCTTGA 166425 Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547 | | ||||| | ||| || || || || | || ||||| || || | ||||| | Sbjct 166424 TGAGGGCAGTCATGACACCTCCAGCCGTCTCAATGCCCAGAGACAGGGGGGCCACATCCA 166365 Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607 || | | | || | || ||| | | ||| | ||||| || || |||| | Sbjct 166364 GCAGCAGTAGGTCCTGGACGTTCTCAGACTTGTCACCCATGAGAATGGCAGCCTGAACTG 166305 Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667 |||||||||| || || || || ||||| || | | || || | | ||||||| Sbjct 166304 CAGCACCATAGGCCACTGCCTCGTCAGGGTTGATGCCCTTGTTCAGGTCCCTTCCATTGA 166245 Query 517668 AAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726 | |||| || | | ||| | ||||| || | | || ||||| || || ||| Sbjct 166244 AGAAATCCTGCAGCTGCT-TCTGGATTTTAGGGATTCTGGTGGAACCTCCCACCAAGACA 166186 Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786 || ||||| | ||||| || |||| || | ||| | |||| || || || ||| Sbjct 166185 ATGTCATGGATCTGTGCCTTGTCCAACTTGGCATCTCTCAGGGCTTTCTCCACAGGCTCA 166126 Query 517787 AGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 517846 || | || || | ||| || | || || || |||||| || | | | Sbjct 166125 AGGGTTCCCCTGAAGAGGTCGGAGTTCATCTCCTCAAAGCGAGCTCTGGTGATGGAGGTG 166066 Query 517847 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 517906 | ||||||| || || | | ||| || | |||||| | | || | || || Sbjct 166065 TAGAAATCAATGCCCTCATAAAGAGAGTCGATTTCAATGCTGGCCTGGGAGCTGGAGGAC 166006 Query 517907 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC--TTTTGCTGATT 517964 |||| | || || | ||||||||||| | || || | | || | ||| | | Sbjct 166005 AGTGTCCTCTTGGCCCTCTCACATGCTGTGCGCAGCCTCCTCAGTGCCCTCTTGTTC--T 165948 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 518024 | | | ||| | ||| |||| |||||||| || || ||| | | || | |||| Sbjct 165947 GGCTAATGTCTTTCTTAAATTTCCTCTTGAACTCCTCCACAAAGTGATTCACCATGCGAT 165888 Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 ||||||| ||||| || |||| | ||| | ||| | || ||| | || | || | | Sbjct 165887 TATCAAAGTCTTCCCCACCCAGGTGAGTGTCTCCAGCAGTGGCTTTGACCTCAAAGATGC 165828 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 ||||||||| | | | || |||||| || |||||||| | ||||| || || | Sbjct 165827 CATCTTCAATGGTTAGGATAGAAACATCAAAAGTACCACCACCTAGGTCAAAGATGAGGA 165768 Query 518145 CATT-CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 |||| | | ||| | | ||| || || ||||| |||| || || || || || Sbjct 165767 CATTACGCTCACCGGTCGT-GCCTTTGTCCAGTCCATAAGCAATGGCTGCTGCCGTGGGC 165709 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 || || || || |||| ||||| || ||||| || || || || || ||||| || Sbjct 165708 TCGTTGATGATCCTCAGCACATTCAGTCCAGCGATCACGCCAGCGTCCTTGGTGGCCTGG 165649 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | || || || || || || |||||||| || || || |||| ||||||| | || Sbjct 165648 CGCTGGGAGTCATTGAAGTAAGCAGGAACGGTGATGACTGCATTGGTTACTTTCTGTCCC 165589 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 || || || || | | ||||| || | | ||| || || |||| ||||||| Sbjct 165588 ATGTAGGCCTCAGCAATCTCCTTCATCTTGACCAGGACCATGGAGGAGATTTCTTCTGGG 165529 Query 518384 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 | || ||| ||| || || |||| || | || || ||| || | Sbjct 165528 TTAAATGTTTTGTTCTCACCTTTGTACTCCACTTGAACTTTGGGCTTTCCCCCATCACTG 165469 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 || ||| | || ||||||| ||||| || || |||||| |||| ||| | || Sbjct 165468 ATGACTGTGAAGGGCCAGTGCTTCATGTCAGACTGAACAACGGAATCATCAAACTTTCGT 165409 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | || || |||||||| | || ||| | || || || || | |||| ||| Sbjct 165408 CCAATGAGACGCTTGGCATCAAAGACGGTGTTGTTGGGGTTCATGGCCACCTGATTTTTT 165349 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||| |||||||| ||||| ||||| || | ||||| || || || | Sbjct 165348 GCAGCATCACCAATCAGCCTCTCTGTGTCTGTGAAGGCCACATAACTCGGGGTGGTTCTG 165289 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 || || || || || ||||| || || ||||| |||| || | || || || || Sbjct 165288 TTGCCCTGGTCGTTGGCAATGATCTCCACTTTTCCATGCTGGAACACCCCAACGCAGGAG 165229 Query 518684 AAAGTTGTTCCTAAATCAATACCAATAGCAAT 518715 | || || || | ||||||||||| | ||| Sbjct 165228 TAGGTGGTACCCAGGTCAATACCAATGGAAAT 165197 Score = 185 bits (204), Expect = 7e-41 Identities = 921/1457 (63%), Gaps = 10/1457 (1%) Strand=Plus/Plus Query 517264 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 517323 |||||| || || ||||||||||| | ||||| || || ||||| |||||||| | | Sbjct 160215 CACATTGAGGATTCCATTGGCATCAATGTCAAAGGTCACCTCAATCTGAGGGACACTGCG 160274 Query 517324 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 517383 | || ||||| |||||| || | ||| | |||| | || || || || || | Sbjct 160275 TGGGGCCGGTGGAATCCCTGTCAGCTCAAACTTGCCCAAAAGGTTGTTGTCCTTGGTCAT 160334 Query 517384 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 517443 || ||| ||||| | | ||||| || | | || || ||||| || || || Sbjct 160335 GGCTCTTTCTCCCTCATACACCTGGATCAGGACCCCGGGCTGGTTGTCTGAGTAGGTGGT 160394 Query 517444 AAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 517502 || ||||| | | ||| || || || ||||| | | || | ||||| | Sbjct 160395 GAAGG-TCTGGGTCTGTTTGGTGGGGATGGTGGTGTTGCGCTTGATGAGGGCAGTCATGA 160453 Query 517503 TACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 517562 ||| || || || || | || ||||| || || | ||||| | || | | | | Sbjct 160454 CACCTCCAGCCGTCTCAATGCCCAGAGACAGGGGGGCCACATCCAGCAGCAGTAGGTCCT 160513 Query 517563 GAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622 | | || ||| | | ||| | ||||| ||||| |||| ||||||||||| || | Sbjct 160514 GGACGTTCTCAGACTTGTCACCCATGAGAATGGCTGCCTGAACTGCAGCACCATAGGCCA 160573 Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 517682 | || || ||||| || | | || || | | |||||||| |||| || Sbjct 160574 CTGCCTCGTCAGGGTTGATGCCCTTGTTCAGGTCCCTTCCATTGAAGAAATCCTGCAGCT 160633 Query 517683 GTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 517741 | | ||| | ||||| || | | || ||||| || || ||||| ||||| | |||| Sbjct 160634 GCT-TCTGGATTTTAGGGATTCTGGTGGAACCTCCCACCAAGACAATGTCATGGATCTGT 160692 Query 517742 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAAC 517801 | || || | || | ||| | |||| || || || ||||| | || || Sbjct 160693 GCCTTGTCAAACTTGGCATCTCTCAGGGCTTTCTCCACAGGCTCAAGGGTTCCCCTGAAG 160752 Query 517802 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCT 517861 | ||| || | || || || |||||| || | | | | ||||||| || Sbjct 160753 AGGTCGGAGTTCATCTCCTCAAAGCGAGCTCTGGTGATGGAGGTGTAGAAATCAATGCCC 160812 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 || | | ||| || | |||||| | | || | || || |||| | || || Sbjct 160813 TCATAAAGAGAGTCGATTTCAATGCTGGCCTGGGAGCTGGAGGACAGTGTCCTCTTGGCC 160872 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGC--TTTTGCTGATTGATTCAAATCTGTTT 517979 | ||||||||||| | || || | | || | ||| | || | | ||| | | Sbjct 160873 CTCTCACATGCTGTGCGCAGCCTCCTCAGTGCCCTCTTGTTC--TGGCTAATGTCTTTCT 160930 Query 517980 TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCAC 518039 || |||| |||||||| || || ||| | | || | ||||||||||| ||||| | Sbjct 160931 TAAATTTCCTCTTGAACTCCTCCACAAAGTGATTCACCATGCGATTATCAAAGTCTTCCC 160990 Query 518040 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 518099 | |||| | ||| | ||| | || ||| | || | || | |||||||||| | | Sbjct 160991 CACCCAGGTGAGTGTCTCCAGCAGTGGCTTTGACCTCAAAGATGCCATCTTCAATGGTTA 161050 Query 518100 AAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT-CATTTCTTTG 518158 | || |||||| || |||||||| | ||||| || || ||||| | | | Sbjct 161051 GGATAGAAACATCAAAAGTACCACCACCTAGGTCAAAGATGAGGACATTACGCTCACCGG 161110 Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218 || | | ||| || || ||||| |||| || || || || || || || || || ||| Sbjct 161111 TCGT-GCCTTTGTCCAGTCCATAAGCAATGGCTGCTGCCGTGGGCTCGTTGATGATCCTC 161169 Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278 | ||||| || ||||| || || || || || ||||| || | || || || || Sbjct 161170 AGCACATTCAGTCCAGCGATCACGCCAGCGTCCTTGGTGGCCTGGCGCTGGGAGTCATTG 161229 Query 518279 AAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCC 518338 || || |||||||| || || || |||| ||||||| | || || || || || Sbjct 161230 AAGTAAGCAGGAACGGTGATGACTGCATTGGTTACTTTCTGTCCCATGTAGGCCTCAGCA 161289 Query 518339 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGAT 518398 | | ||||| || | | ||| || || |||| ||||||| | || ||| Sbjct 161290 ATCTCCTTCATCTTGACCAGGACCATGGAGGAGATTTCTTCTGGGTTAAATGTTTTGTTC 161349 Query 518399 TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGC 518458 ||| || || |||| || | || || ||| || | || ||| | || ||| Sbjct 161350 TCACCTTTGTACTCCACTTGAACTTTGGGCTTTCCCCCATCACTGATGACTGTGAAGGGC 161409 Query 518459 CAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 518518 |||| ||||| || || |||||| |||| ||| | || ||||| | || || Sbjct 161410 CAGTGCTTCATGTCAGACTGAACAACGGAATCATCAAACTTTCGTCCAATGAGACGCTTG 161469 Query 518519 GCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATC 518578 |||||||| | || ||| | || || || || | |||| ||| || ||||| |||||| Sbjct 161470 GCATCAAAGACGGTGTTGTTGGGGTTCATGGCCACCTGATTTTTTGCAGCATCACCAATC 161529 Query 518579 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTC 518638 || ||||| ||||| || | ||||| || || || | || || || || || Sbjct 161530 AGCCTCTCTGTGTCTGTGAAGGCCACATAACTCGGGGTGGTTCTGTTGCCCTGGTCGTTG 161589 Query 518639 GCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAA 518698 ||||| || || ||||| |||| || | || || || || | || || || | Sbjct 161590 GCAATGATCTCCACTTTTCCATGCTGGAACACCCCAACGCAGGAGTAGGTGGTACCCAGG 161649 Query 518699 TCAATACCAATAGCAAT 518715 ||||||||||| | ||| Sbjct 161650 TCAATACCAATGGAAAT 161666 >seq3207 Length=2023586 Score = 172 bits (190), Expect = 4e-37 Identities = 462/697 (66%), Gaps = 21/697 (3%) Strand=Plus/Minus Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 |||| ||||| ||||| || |||| | || | |||| || ||| | || | || Sbjct 1816298 CGATCGTCAAAGTCTTCCCCACCCAGGTGTGTGTCCCCTGCTGTGGCTTTCACCTCAAAT 1816239 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | ||||||||| | | || | | |||||| || || || || | ||||| || Sbjct 1816238 ATTCCATCTTCTATTGCCAGGACTGACACATCAAAAGTACCCCCTCCAAGGTCAAAGATC 1816179 Query 518141 AGTACATTCATTTCTTTGTCTTGGTT---TTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 |||||| ||| ||| ||| ||| || |||||||| || | | || Sbjct 1816178 GATACATTGCGTTCCC---CTTTGTTCCCTTTGTCCAGACCATAGGCGGATG-----GCT 1816127 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 || || ||| | || | || |||||||| || ||||| || ||||||||| | || Sbjct 1816126 GTCGGCTCACTGATGACCCTAAAAACATTTAGTCCAGCGATGACTCCTGCATCCTCGGTT 1816067 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA--CTT 518315 || || | ||||| || ||||| || || || || || || || || | |||| ||| Sbjct 1816066 GCCTGGCGCTGTGAGTCATTAAAGTAAGCTGGGACCGTGATGACAGCGTT-GTTAACCTT 1816008 Query 518316 CTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375 | | |||| | | ||| | | | | ||||||| || | ||| || || | || Sbjct 1816007 GTGTCCCAAGA-AGGCGTCCGAAATCTCTCTCATTTTCACCAAGACCATGGAGGAGACTT 1815949 Query 518376 GTTCTGGG--GAATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGGTTTAT 518432 || || ||| || || | ||| |||| | | |||| | | ||||| Sbjct 1815948 CCTCAGGATAGAAGGTT--TTAGTTTCTCCTTTGTGCTCA-ACTTGTACTTTGGGTTTTC 1815892 Query 518433 TACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCAT 518492 || | || ||| || ||||| ||||| |||||| ||||| | ||| | |||||| Sbjct 1815891 CACTATCACTAACCACGTTAAAAGGCCAAAGTTTCATGTCTGACCGGACAATGGGGTCAT 1815832 Query 518493 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552 ||| || ||||| | ||||| |||||||| | ||||||| | || || || ||| Sbjct 1815831 CAAACCTACTGCCAATAAGACGTTTGGCATCAAATACAGTATTGTTAGGGTTCATGGCAA 1815772 Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 518612 |||| | |||||||||||||||||| || ||||| ||||| || | ||||| | Sbjct 1815771 CTTGGTTTTTGGCTGCATCTCCAATTAGTCTCTCTGTGTCTGTGAAGGCCACATAGCTGG 1815712 Query 518613 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 518672 | | ||| | || || || ||||| ||||| |||||||||||||||| ||| |||| | Sbjct 1815711 GTGATGTCCCGTTTCCCTGGTCATTGGCAATTATTTCAACTTTACCATGTTGAAATACCC 1815652 Query 518673 CTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 |||||| | | | |||||| | |||||| ||||| Sbjct 1815651 ATACACATGAATAGGGTGTTCCAAGATCAATTCCAAT 1815615 >seq978 Length=374410 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | |||||| || | ||||||||||| |||||||| ||||| | || ||| Sbjct 79804 TTTTTGTCCAAACCATAGGCTATCGCAGCAGCAGTGGGTTCATTGATAATCCGCAGGACA 79863 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||| ||||| | |||||||| || |||||||| || || || || || || || Sbjct 79864 TTAAGACCGGCAATGGTGCCTGCATCCTTTGTGGCTTGCCTCTGGGAGTCATTGAAGTAA 79923 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||| ||||| | || |||| Sbjct 79924 GCAGGTACAGTGACCACTGCAT 79945 Score = 98.7 bits (108), Expect = 8e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 || ||||| |||| ||||| || || ||||||||||| | ||||| || || |||||| Sbjct 77139 TTGTCAGCAGCAGAGACATTGAGGATGCCATTGGCATCGATGTCAAAGGTCACCTCAATT 77198 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 || || |||||||| ||||||| ||||| || || | |||| |||| || ||||| Sbjct 77199 TGTGGAACCCCTCTTGGAGCAGGGGGGATGCCAGTCAGCTCAAATTTTCCAAGGATATTA 77258 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTC 517398 ||||| || || | || |||||| || Sbjct 77259 TTATCCTTTGTCATAGCTCTTTCACCTTC 77287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780479254921990