Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clupea_20harengus_20[refseq_20GCF_5F000966335.1_202015-03-30]
6,915 sequences; 807,711,962 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1943 87.8 2e-12
>seq1943
Length=432286
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551
||||||||| ||||| || | ||| ||||| || | ||| | ||| || || ||
Sbjct 423452 CTCATCCTTGCTGGTGTATTCAACAATCTCTGTGCATAGATTGCTGCACTTGATTGTGCC 423393
Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611
| |||| || || ||||| |||||| ||||| || ||||||||||| || || ||
Sbjct 423392 AAGGTTCTGCTGATTGCTCTTGCGGTTGCAGGCATCTTTATAGAGCATGTAAGGTGTGCC 423333
Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647
|||||||||||| |||| | || || | ||||||
Sbjct 423332 CGTCTCCGTCTGAGACTCTATGATGGCGTACCACAC 423297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589929803534600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |