Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clupea_20harengus_20[refseq_20GCF_5F000966335.1_202015-03-30] 6,915 sequences; 807,711,962 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq4994 102 1e-16 seq3833 102 1e-16 seq3371 100 4e-16 seq2444 100 4e-16 seq2204 100 4e-16 seq257 100 4e-16 seq4094 98.7 1e-15 seq2663 98.7 1e-15 seq1449 82.4 1e-10 >seq4994 Length=820280 Score = 102 bits (112), Expect = 1e-16 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 8645 GCCGATGCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGAC 8704 ||| |||| | |||||||||||||||||||| ||||| |||| ||||| | |||||||| Sbjct 812150 GCCAATGC--TCTTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGAC 812207 Query 8705 CGGGGTTCGATTCCCCGACGAGGAG 8729 |||||||| ||||||||||| |||| Sbjct 812208 CGGGGTTCAATTCCCCGACGGGGAG 812232 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 812161 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 812220 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 812221 CCCGACGGGGAG 812232 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||| Sbjct 812234 AACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 812175 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 812174 TATACTAACGAGGA 812161 >seq3833 Length=6093471 Score = 102 bits (112), Expect = 1e-16 Identities = 69/76 (91%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 |||||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| | Sbjct 5353968 CAGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 5353909 Query 11786 TTCCCCGACGAGGAGG 11801 |||||||||| ||||| Sbjct 5353908 TTCCCCGACGGGGAGG 5353893 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 5353965 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 5353906 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 5353905 CCCGACGGGGAG 5353894 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 5353894 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5353953 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 5353954 TACTAACGAGGA 5353965 >seq3371 Length=3225571 Score = 100 bits (110), Expect = 4e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| Sbjct 2693226 CCAATCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCA 2693167 Query 11785 ATTCCCCGACGAGGAGG 11801 ||||||||||| ||||| Sbjct 2693166 ATTCCCCGACGGGGAGG 2693150 Score = 100 bits (110), Expect = 4e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| Sbjct 2694362 CCACTCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCA 2694303 Query 11785 ATTCCCCGACGAGGAGG 11801 ||||||||||| ||||| Sbjct 2694302 ATTCCCCGACGGGGAGG 2694286 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| | Sbjct 2698647 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 2698706 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 2698707 TTCCCCGACGGGGAG 2698721 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| | Sbjct 2701389 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 2701448 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 2701449 TTCCCCGACGGGGAG 2701463 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 2693222 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 2693163 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2693162 CCCGACGGGGAG 2693151 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 2694358 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 2694299 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2694298 CCCGACGGGGAG 2694287 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 2701392 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 2701451 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 2701452 CCCGACGGGGAGG 2701464 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 2698650 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 2698709 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 2698710 CCCGACGGGGAG 2698721 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| || |||||| Sbjct 2693151 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACTA 2693210 Query 139413 TACTAACGAGGATT 139426 |||||||||||||| Sbjct 2693211 TACTAACGAGGATT 2693224 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| || |||||| Sbjct 2694287 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACTA 2694346 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2694347 TACTAACGAGGA 2694358 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2698721 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2698662 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2698661 TACTAACGAGGA 2698650 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2701463 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2701404 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2701403 TACTAACGAGGA 2701392 Score = 86.0 bits (94), Expect = 8e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||| | Sbjct 2702968 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACACGGGAGACCGGGGTTCAA 2702909 Query 8715 TT 8716 || Sbjct 2702908 TT 2702907 >seq2444 Length=222161 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| | Sbjct 187707 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 187766 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 187767 TTCCCCGACGGGGAG 187781 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| | Sbjct 188336 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 188395 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 188396 TTCCCCGACGGGGAG 188410 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| | Sbjct 197527 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 197586 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 197587 TTCCCCGACGGGGAG 197601 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| | Sbjct 198200 TACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 198259 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 198260 TTCCCCGACGGGGAG 198274 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 187710 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 187769 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 187770 CCCGACGGGGAG 187781 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 188339 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 188398 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 188399 CCCGACGGGGAG 188410 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 197530 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 197589 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 197590 CCCGACGGGGAG 197601 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 198203 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 198262 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 198263 CCCGACGGGGAG 198274 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 187781 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 187722 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 187721 TACTAACGAGGA 187710 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 188410 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 188351 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 188350 TACTAACGAGGA 188339 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 197601 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 197542 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 197541 TACTAACGAGGA 197530 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 198274 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 198215 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 198214 TACTAACGAGGA 198203 >seq2204 Length=200101 Score = 100 bits (110), Expect = 4e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 200002 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 199943 Query 8718 CCCGACGAGGAGCAGAG 8734 ||||||| |||| |||| Sbjct 199942 CCCGACGGGGAG-AGAG 199927 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 200002 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 199943 Query 11789 CCCGACGAGGAGGGAG 11804 ||||||| |||| ||| Sbjct 199942 CCCGACGGGGAGAGAG 199927 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| || |||||| Sbjct 199931 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACTA 199990 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 199991 TACTAACGAGGA 200002 >seq257 Length=13053552 Score = 100 bits (110), Expect = 4e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| Sbjct 10069824 CCAATCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCA 10069765 Query 11785 ATTCCCCGACGAGGAGG 11801 ||||||||||| ||||| Sbjct 10069764 ATTCCCCGACGGGGAGG 10069748 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 10067473 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 10067414 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 10067413 CCCGACGGGGAG 10067402 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 10069820 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 10069761 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 10069760 CCCGACGGGGAG 10069749 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 10067473 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 10067414 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 10067413 CCCGACGGGGAGG 10067401 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| || |||||| Sbjct 10069749 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACTA 10069808 Query 139413 TACTAACGAGGATT 139426 |||||||||||||| Sbjct 10069809 TACTAACGAGGATT 10069822 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| || |||||| Sbjct 10067402 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACTA 10067461 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 10067462 TACTAACGAGGAT 10067474 >seq4094 Length=298275 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 16256 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 16315 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 16316 CCCGACGGGGAG 16327 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 16256 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 16315 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 16316 CCCGACGGGGAGG 16328 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| || |||||| Sbjct 16327 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACTA 16268 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 16267 TACTAACGAGGAT 16255 >seq2663 Length=1584130 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 15282 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 15223 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 15222 CCCGACGGGGAG 15211 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| |||| Sbjct 15282 TCCTCGTTAGTATAGTGGATAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 15223 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 15222 CCCGACGGGGAGG 15210 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| || |||||| Sbjct 15211 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCACTA 15270 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 15271 TACTAACGAGGAT 15283 >seq1449 Length=84295 Score = 82.4 bits (90), Expect = 1e-10 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||| ||||||||||||| ||||| ||| ||||| | |||||||||||||||||||| Sbjct 41792 TTCCTCTTTAGTATAGTGGTGAGTATCCCCACCTGTCACGCGGGAGACCGGGGTTCGATT 41733 Query 8717 CCC 8719 ||| Sbjct 41732 CCC 41730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652788369727600