Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clupea_20harengus_20[refseq_20GCF_5F000966335.1_202015-03-30] 6,915 sequences; 807,711,962 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2999 306 1e-77 seq4946 302 1e-76 seq3207 183 9e-41 seq978 152 2e-31 seq257 91.5 4e-13 seq3021 84.2 7e-11 >seq2999 Length=180986 Score = 306 bits (338), Expect = 1e-77 Identities = 977/1502 (65%), Gaps = 15/1502 (1%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || || || || |||||||| || || || || || || || Sbjct 161603 GTGGAGATCATTGCCAACGACCAGGGCAACAGAACCACCCCGAGTTATGTGGCCTTCACA 161544 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||| | ||||||||||| ||||||||||||| | || || || || || Sbjct 161543 GACACAGAGAGGCTGATTGGTGATGCTGCAAAAAATCAGGTGGCCATGAACCCCAACAAC 161484 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || |||||||| ||||| || ||||| ||| ||| ||| | || ||| Sbjct 161483 ACCGTCTTTGATGCCAAGCGTCTCATTGGACGAAAGTTTGATGATTCCGTTGTTCAGTCT 161424 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || || || | | || || | || || | || | Sbjct 161423 GACATGAAGCACTGGCCCTTCACAGTCATC---AGTGATGGGGGAAAGCCCAAAGTTCAA 161367 Query 349499 GTTGAATATAAAGGTGAACA-AAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTT 349556 || || || |||||||| | |||||| ||| |||| |||||||| || || ||||| Sbjct 161366 GTGGAGTACAAAGGTGAGAACAAAACA--TTTAACCCAGAAGAAATCTCCTCCATGGTCC 161309 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||||||| |||||||| || || | || | | |||||| |||| || | Sbjct 161308 TGGTCAAGATGAAGGAGATTGCTGAGGCCTACATGGGACAGAAAGTAACCAATGCAGTCA 161249 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || || || || || ||||| ||||||| || || || || |||||| | Sbjct 161248 TCACCGTTCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAGGACGCTGGCGTGA 161189 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | ||||| || || || || || || ||||| || ||||| ||||| |||| Sbjct 161188 TCGCTGGACTGAATGTGCTGAGGATCATCAACGAGCCCACGGCAGCAGCCATTGCTTATG 161129 Query 349737 GGCTTGATAAAATGAGTGACCAA-GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 | || || ||| | |||| || ||| | || || ||||| ||||||||||| Sbjct 161128 GACTGGACAAAGGCAC-GACCGGTGAGCGTAATGTCCTCATCTTTGACCTAGGTGGTGGT 161070 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||||||||| || | ||||| ||||||| || || ||||| || ||||| |||||| Sbjct 161069 ACTTTTGATGTTTCTATCCTAACCATTGAAGATGGCATCTTTGAGGTCAAAGCCACTGCT 161010 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 || || || || || ||||| ||||| ||||||||||| | || || ||||| | Sbjct 161009 GGAGACACTCACCTGGGTGGGGAAGACTTTGATAATCGCATGGTGAATCACTTTGTGGAG 160950 Query 349916 GAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 || || ||| | || ||| | || ||| | | || || ||| || | | || Sbjct 160949 GAGTTCAAGAGGAAATTTAAGAAAGACATTAGCCAGAACAAGAGGGCACTGAGGAGGCTG 160890 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | || || ||||| | || ||| | | | || || | |||| || |||||| Sbjct 160889 CGCACAGCATGTGAGAGGGCCAAGAGGACACTGTCCTCCAGCTCCCAGGCCAGCATTGAA 160830 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || |||||| ||| |||| ||||||| | || || || | ||||| ||||| Sbjct 160829 ATCGACTCTCTTTATGAGGGCATTGATTTCTACACCTCCATCACCAGAGCTCGCTTTGAG 160770 Query 350096 GA-ATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 || || | | || || || || | ||| | || |||||||| |||| | | ||| Sbjct 160769 GAGATGAACT-CCGACCTCTTCAGGGGAACCCTTGAGCCTGTGGAGAAAGCCCTGAGAGA 160711 Query 350155 TGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 ||| || | ||| ||||| |||| | || || || || ||||| || | || Sbjct 160710 TGCCAAGTTTGACAAGGCACAGATCCATGACATTGTCTTGGTGGGAGGTTCCACCAGAAT 160651 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT--TCTAGATCA 350272 || ||| | || || || || || || ||||| || | |||| | || | Sbjct 160650 CCCTAAAATCCAGAAGCAGCTGCAGGATTTCTTCAATGG-AAGGGACCTGAACAAGGGC- 160593 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 || || || || || || || || ||||||||||| ||||||||| | ||| | || Sbjct 160592 ATCAACCCTGACGAGGCAGTGGCCTATGGTGCTGCAGTTCAGGCAGCCATTCTCATGGGT 160533 Query 350333 AATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392 | ||| | || | | || ||| | || || ||||| | || || || || || Sbjct 160532 GACAAGTCTGAGAACGTCCAGGACCTACTGCTGCTGGATGTGGCCCCCCTGTCTCTGGGC 160473 Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452 | || || |||| | || ||||||| || || | || | || | || || Sbjct 160472 ATTGAGACGGCTGGAGGTGTCATGACTGCCCTCATCAAGCGCAACACCACCATCCCCACC 160413 Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512 ||| || |||| || || | || | |||| || ||||| | ||| || || || Sbjct 160412 AAACAGACCCAGACCTTCACCACCTACTCAGACAACCAGCCCGGGGTCCTGATCCAGGTG 160353 Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572 | ||| || ||| | || || || || || || | || | ||| || | Sbjct 160352 TATGAGGGAGAAAGAGCCATGACCAAGGACAACAACCTTTTGGGCAAGTTTGAGCTGACA 160293 Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632 | |||||||| || | | || ||||||||||| || | || || |||||| | Sbjct 160292 GGGATTCCACCGGCCCCACGCAGTGTCCCTCAGATTGAGGTGACCTTTGACATTGATGCC 160233 Query 350633 AATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTAAGGTAGAA 350692 ||||| || | ||||| | || || || ||| | ||| ||| | || || Sbjct 160232 AATGGAATCCTCAATGTGTCAGCTGTAGACAAAAGCACTGGCAAAGAGAACAAAATAACC 160173 Query 350693 ATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATGACACAAGATGCC 350752 || || ||||| ||| || | || || ||||||||||||||| ||| ||||| Sbjct 160172 ATCACAAATGACAAAGGCAGGTTGAGCAAGGAGGATATTGAGAAAATGGTACAGGATGCA 160113 Query 350753 GA 350754 || Sbjct 160112 GA 160111 Score = 302 bits (334), Expect = 1e-76 Identities = 976/1502 (65%), Gaps = 15/1502 (1%) Strand=Plus/Plus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || || || || |||||||| || || || || || || || Sbjct 165260 GTGGAGATCATTGCCAACGACCAGGGCAACAGAACCACCCCGAGTTATGTGGCCTTCACA 165319 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||| | ||||||||||| ||||||||||||| | || || || || || Sbjct 165320 GACACAGAGAGGCTGATTGGTGATGCTGCAAAAAATCAGGTGGCCATGAACCCCAACAAC 165379 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || |||||||| ||||| || ||||| ||| ||| ||| | || ||| Sbjct 165380 ACCGTCTTTGATGCCAAGCGTCTCATTGGACGAAAGTTTGATGATTCCGTTGTTCAGTCT 165439 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || || || | | || || | || || | || | Sbjct 165440 GACATGAAGCACTGGCCCTTCACAGTCATC---AGTGATGGGGGAAAGCCCAAAGTTCAA 165496 Query 349499 GTTGAATATAAAGGTGAACA-AAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTT 349556 || || || |||||||| | |||||| ||| |||| |||||||| || || ||||| Sbjct 165497 GTGGAGTACAAAGGTGAGAACAAAACA--TTTAACCCAGAAGAAATCTCCTCCATGGTCC 165554 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||||||| |||||||| || || | || | | |||||| |||| || | Sbjct 165555 TGGTCAAGATGAAGGAGATTGCTGAGGCCTACATGGGACAGAAAGTAACCAATGCAGTCA 165614 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || || || || || ||||| ||||||| || || || || |||||| | Sbjct 165615 TCACCGTTCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAGGACGCTGGCGTGA 165674 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | ||||| || || || || || || ||||| || ||||| ||||| |||| Sbjct 165675 TCGCTGGACTGAATGTGCTGAGGATCATCAACGAGCCCACGGCAGCAGCCATTGCTTATG 165734 Query 349737 GGCTTGATAAAATGAGTGACCAA-GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 | || || ||| | |||| || ||| | || || ||||| ||||||||||| Sbjct 165735 GACTGGACAAAGGCAC-GACCGGTGAGCGTAATGTCCTCATCTTTGACCTAGGTGGTGGT 165793 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||||||||| || | ||||| ||||||| || || ||||| || ||||| |||||| Sbjct 165794 ACTTTTGATGTTTCTATCCTAACCATTGAAGATGGCATCTTTGAGGTCAAAGCCACTGCT 165853 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 || || || || || ||||| ||||| ||||||||||| | || || ||||| | Sbjct 165854 GGAGACACTCACCTGGGTGGGGAAGACTTTGATAATCGCATGGTGAATCACTTTGTGGAG 165913 Query 349916 GAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 || || ||| | || ||| | || ||| | | || || ||| || | | || Sbjct 165914 GAGTTCAAGAGGAAATTTAAGAAAGACATTAGCCAGAACAAGAGGGCACTGAGGAGGCTG 165973 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | || || ||||| | || ||| | | | || || | |||| || |||||| Sbjct 165974 CGCACAGCATGTGAGAGGGCCAAGAGGACACTGTCCTCCAGCTCCCAGGCCAGCATTGAA 166033 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || |||||| ||| |||| ||||||| | || || || | ||||| ||||| Sbjct 166034 ATCGACTCTCTTTATGAGGGCATTGATTTCTACACCTCCATCACCAGAGCTCGCTTTGAG 166093 Query 350096 GA-ATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 || || | | || || || || | ||| | || |||||||| |||| | | ||| Sbjct 166094 GAGATGAACT-CCGACCTCTTCAGGGGAACCCTTGAGCCTGTGGAGAAAGCCCTGAGAGA 166152 Query 350155 TGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 ||| || || ||| ||||| |||| | || || || || ||||| || | || Sbjct 166153 TGCCAAGTTGGACAAGGCACAGATCCATGACATTGTCTTGGTGGGAGGTTCCACCAGAAT 166212 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT--TCTAGATCA 350272 || ||| | || || || || || || ||||| || | |||| | || | Sbjct 166213 CCCTAAAATCCAGAAGCAGCTGCAGGATTTCTTCAATGG-AAGGGACCTGAACAAGGGC- 166270 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 || || || || || || || || ||||||||||| |||||||| | ||| | || Sbjct 166271 ATCAACCCTGACGAGGCAGTGGCCTATGGTGCTGCAGTTCAGGCTGCCATTCTCATGGGT 166330 Query 350333 AATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392 | ||| | || | | || ||| | || || ||||| | || || || || || Sbjct 166331 GACAAGTCTGAGAACGTCCAGGACCTACTGCTGCTGGATGTGGCCCCCCTGTCTCTGGGC 166390 Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452 | || || |||| | || ||||||| || || | || | || | || || Sbjct 166391 ATTGAGACGGCTGGAGGTGTCATGACTGCCCTCATCAAGCGCAACACCACCATCCCCACC 166450 Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512 ||| || |||| || || | || | |||| || ||||| | ||| || || || Sbjct 166451 AAACAGACCCAGACCTTCACCACCTACTCAGACAACCAGCCCGGGGTCCTGATCCAGGTG 166510 Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572 | ||| || ||| | || || || || || || | || | ||| || | Sbjct 166511 TATGAGGGAGAAAGAGCCATGACCAAGGACAACAACCTTTTGGGCAAGTTTGAGCTGACA 166570 Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632 | |||||||| || | | || ||||||||||| || | || || |||||| | Sbjct 166571 GGGATTCCACCGGCCCCACGCAGTGTCCCTCAGATTGAGGTGACCTTTGACATTGATGCC 166630 Query 350633 AATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTAAGGTAGAA 350692 ||||| || | ||||| | || | || ||| | ||| ||| | || || Sbjct 166631 AATGGAATCCTCAATGTGTCAGCTGCAGACAAAAGCACTGGCAAAGAGAACAAAATAACC 166690 Query 350693 ATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATGACACAAGATGCC 350752 || || ||||| ||| || | || || ||||||||||||||| ||| ||||| Sbjct 166691 ATCACAAATGACAAAGGCAGGTTGAGCAAGGAGGATATTGAGAAAATGGTACAGGATGCA 166750 Query 350753 GA 350754 || Sbjct 166751 GA 166752 Score = 104 bits (114), Expect = 7e-17 Identities = 364/554 (66%), Gaps = 16/554 (3%) Strand=Plus/Minus Query 183245 AATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGA 183304 ||| ||||| ||||| || |||||||| || || || || || ||||| || | | | Sbjct 166321 AATGGCAGCCTGAACTGCAGCACCATAGGCCACTGCCTCGTCAGGGTTGAT-GCCCTTGT 166263 Query 183305 TAAT-TCTTTGCCATTAAA-AAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTT 183362 | | || | ||||| || |||| ||| | || | || ||||| || ||||| || Sbjct 166262 TCAGGTCCCTTCCATTGAAGAAATCCTGCA-GCTGCTTCTGGATTTTAGGGATTCTGGTG 166204 Query 183363 GAACCACCGACTAATACTACTTCATCGATAT-TACTTTTACTAATTTGTGAATCTTTTAA 183421 ||||| || || || || | |||| ||| | | | || | || ||| | |||| | | Sbjct 166203 GAACCTCCCACCAAGACAATGTCATGGATCTGTGCCTTGTCCAACTTG-GCATCTCTCAG 166145 Query 183422 AACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTA--TACATAACTCTTCTAAT 183479 |||| || ||||| || | ||| || || | || | ||| ||| || || Sbjct 166144 GGCTTTCTCCACAGGCTCAAGGGTTCCCCTGAAGAGGTCGGAGTTCAT--CTCCTCAAAG 166087 Query 183480 CTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATC 183539 | ||||| || | || | | || ||||| || | ||| | || || |||||||| Sbjct 166086 CGAGCTCTGGTGATGGAGGTGTAGAAATCAATGCCCTCATAAAGAGAGTCGATTTCAATG 166027 Query 183540 GATGTTTGTGTAGATG-ATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCG 183598 | || | || || | || | ||| || || || | ||||||||||| | || | Sbjct 166026 CTGGCCTGGG-AGCTGGAGGACAGTGTCCTCTTGGCCCTCTCACATGCTGTGCGCAGCCT 165968 Query 183599 ACGTAATGA--TCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTA 183656 | | || ||||| || | |||| |||| ||| ||| || || || || Sbjct 165967 CCTCAGTGCCCTCTTG--TTCTGGCTAATGTCTTTCTTAAATTTCCTCTTGAACTCCTCC 165910 Query 183657 ATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCA 183716 | ||| || | | | | ||||||| ||||| ||||| | || || || |||||| Sbjct 165909 ACAAAGTGATTCACCATGCGATTATCAAAGTCTTCCCCACCCAGGTGAGTGTCTCCAGCA 165850 Query 183717 GTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCA 183776 || ||||| || ||||| || || |||||||| ||| || || |||||||| |||||| Sbjct 165849 GTGGCTTTGACCTCAAAGATGCCATCTTCAATGGTTAGGATAGAAACATCAAAAGTACCA 165790 Query 183777 CCACCCAAATCAAA 183790 ||||| | ||||| Sbjct 165789 CCACCTAGGTCAAA 165776 Score = 98.7 bits (108), Expect = 3e-15 Identities = 363/554 (66%), Gaps = 16/554 (3%) Strand=Plus/Plus Query 183245 AATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGA 183304 ||| || || ||||| || |||||||| || || || || || ||||| || | | | Sbjct 160542 AATGGCTGCCTGAACTGCAGCACCATAGGCCACTGCCTCGTCAGGGTTGAT-GCCCTTGT 160600 Query 183305 TAAT-TCTTTGCCATTAAA-AAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTT 183362 | | || | ||||| || |||| ||| | || | || ||||| || ||||| || Sbjct 160601 TCAGGTCCCTTCCATTGAAGAAATCCTGCA-GCTGCTTCTGGATTTTAGGGATTCTGGTG 160659 Query 183363 GAACCACCGACTAATACTACTTCATCGATAT-TACTTTTACTAATTTGTGAATCTTTTAA 183421 ||||| || || || || | |||| ||| | | | || | || ||| | |||| | | Sbjct 160660 GAACCTCCCACCAAGACAATGTCATGGATCTGTGCCTTGTCAAACTTG-GCATCTCTCAG 160718 Query 183422 AACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTA--TACATAACTCTTCTAAT 183479 |||| || ||||| || | ||| || || | || | ||| ||| || || Sbjct 160719 GGCTTTCTCCACAGGCTCAAGGGTTCCCCTGAAGAGGTCGGAGTTCAT--CTCCTCAAAG 160776 Query 183480 CTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATC 183539 | ||||| || | || | | || ||||| || | ||| | || || |||||||| Sbjct 160777 CGAGCTCTGGTGATGGAGGTGTAGAAATCAATGCCCTCATAAAGAGAGTCGATTTCAATG 160836 Query 183540 GATGTTTGTGTAGATG-ATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCG 183598 | || | || || | || | ||| || || || | ||||||||||| | || | Sbjct 160837 CTGGCCTGGG-AGCTGGAGGACAGTGTCCTCTTGGCCCTCTCACATGCTGTGCGCAGCCT 160895 Query 183599 ACGTAATGA--TCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTA 183656 | | || ||||| || | |||| |||| ||| ||| || || || || Sbjct 160896 CCTCAGTGCCCTCTTG--TTCTGGCTAATGTCTTTCTTAAATTTCCTCTTGAACTCCTCC 160953 Query 183657 ATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCA 183716 | ||| || | | | | ||||||| ||||| ||||| | || || || |||||| Sbjct 160954 ACAAAGTGATTCACCATGCGATTATCAAAGTCTTCCCCACCCAGGTGAGTGTCTCCAGCA 161013 Query 183717 GTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCA 183776 || ||||| || ||||| || || |||||||| ||| || || |||||||| |||||| Sbjct 161014 GTGGCTTTGACCTCAAAGATGCCATCTTCAATGGTTAGGATAGAAACATCAAAAGTACCA 161073 Query 183777 CCACCCAAATCAAA 183790 ||||| | ||||| Sbjct 161074 CCACCTAGGTCAAA 161087 >seq4946 Length=1076177 Score = 302 bits (334), Expect = 1e-76 Identities = 976/1502 (65%), Gaps = 15/1502 (1%) Strand=Plus/Plus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || || || || |||||||| || || || || || || || Sbjct 129 GTGGAGATCATTGCCAACGACCAGGGCAACAGAACCACCCCGAGTTATGTGGCCTTCACA 188 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||| | ||||||||||| ||||||||||||| | || || || || || Sbjct 189 GACACAGAGAGGCTGATTGGTGATGCTGCAAAAAATCAGGTGGCCATGAACCCCAACAAC 248 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || |||||||| ||||| || ||||| ||| ||| ||| | || ||| Sbjct 249 ACCGTCTTTGATGCCAAGCGTCTCATTGGACGAAAGTTTGATGATTCCGTTGTTCAGTCT 308 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || || || | | || || | || || | || | Sbjct 309 GACATGAAGCACTGGCCCTTCACAGTCATC---AGTGATGGGGGAAAGCCCAAAGTTCAA 365 Query 349499 GTTGAATATAAAGGTGAACA-AAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTT 349556 || || || |||||||| | |||||| ||| |||| |||||||| || || ||||| Sbjct 366 GTGGAGTACAAAGGTGAGAACAAAACA--TTTAACCCAGAAGAAATCTCCTCCATGGTCC 423 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | || || |||||||| |||||||| || || | || | | |||||| |||| || | Sbjct 424 TGGTCAAGATGAAGGAGATTGCTGAGGCCTACATGGGACAGAAAGTAACCAATGCAGTCA 483 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | || || || || || || ||||| ||||||| || || || || |||||| | Sbjct 484 TCACCGTTCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAGGACGCTGGCGTGA 543 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | || || | ||||| || || || || || || ||||| || ||||| ||||| |||| Sbjct 544 TCGCTGGACTGAATGTGCTGAGGATCATCAACGAGCCCACGGCAGCAGCCATTGCTTATG 603 Query 349737 GGCTTGATAAAATGAGTGACCAA-GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 | || || ||| | |||| || ||| | || || ||||| ||||||||||| Sbjct 604 GACTGGACAAAGGCAC-GACCGGTGAGCGTAATGTCCTCATCTTTGACCTAGGTGGTGGT 662 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||||||||| || | ||||| ||||||| || || ||||| || ||||| |||||| Sbjct 663 ACTTTTGATGTTTCTATCCTAACCATTGAAGATGGCATCTTTGAGGTCAAAGCCACTGCT 722 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 || || || || || ||||| ||||| ||||||||||| | || || ||||| | Sbjct 723 GGAGACACTCACCTGGGTGGGGAAGACTTTGATAATCGCATGGTGAATCACTTTGTGGAG 782 Query 349916 GAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTA 349975 || || ||| | || ||| | || ||| | | || || ||| || | | || Sbjct 783 GAGTTCAAGAGGAAATTTAAGAAAGACATTAGCCAGAACAAGAGGGCACTGAGGAGGCTG 842 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | || || ||||| | || ||| | | | || || | |||| || |||||| Sbjct 843 CGCACAGCATGTGAGAGGGCCAAGAGGACACTGTCCTCCAGCTCCCAGGCCAGCATTGAA 902 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || |||||| ||| |||| ||||||| | || || || | ||||| ||||| Sbjct 903 ATCGACTCTCTTTATGAGGGCATTGATTTCTACACCTCCATCACCAGAGCTCGCTTTGAG 962 Query 350096 GA-ATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 || || | | || || || || | ||| | || |||||||| |||| | | ||| Sbjct 963 GAGATGAACT-CCGACCTCTTCAGGGGAACCCTTGAGCCTGTGGAGAAAGCCCTGAGAGA 1021 Query 350155 TGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTAT 350214 ||| || || ||| ||||| |||| | || || || || ||||| || | || Sbjct 1022 TGCCAAGTTGGACAAGGCACAGATCCATGACATTGTCTTGGTGGGAGGTTCCACCAGAAT 1081 Query 350215 TCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT--TCTAGATCA 350272 || ||| | || || || || || || ||||| || | |||| | || | Sbjct 1082 CCCTAAAATCCAGAAGCAGCTGCAGGATTTCTTCAATGG-AAGGGACCTGAACAAGGGC- 1139 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 || || || || || || || || ||||||||||| |||||||| | ||| | || Sbjct 1140 ATCAACCCTGACGAGGCAGTGGCCTATGGTGCTGCAGTTCAGGCTGCCATTCTCATGGGT 1199 Query 350333 AATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392 | ||| | || | | || ||| | || || ||||| | || || || || || Sbjct 1200 GACAAGTCTGAGAACGTCCAGGACCTACTGCTGCTGGATGTGGCCCCCCTGTCTCTGGGC 1259 Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452 | || || |||| | || ||||||| || || | || | || | || || Sbjct 1260 ATTGAGACGGCTGGAGGTGTCATGACTGCCCTCATCAAGCGCAACACCACCATCCCCACC 1319 Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512 ||| || |||| || || | || | |||| || ||||| | ||| || || || Sbjct 1320 AAACAGACCCAGACCTTCACCACCTACTCAGACAACCAGCCCGGGGTCCTGATCCAGGTG 1379 Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572 | ||| || ||| | || || || || || || | || | ||| || | Sbjct 1380 TATGAGGGAGAAAGAGCCATGACCAAGGACAACAACCTTTTGGGCAAGTTTGAGCTGACA 1439 Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632 | |||||||| || | | || ||||||||||| || | || || |||||| | Sbjct 1440 GGGATTCCACCGGCCCCACGCAGTGTCCCTCAGATTGAGGTGACCTTTGACATTGATGCC 1499 Query 350633 AATGGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTAAGGTAGAA 350692 ||||| || | ||||| | || | || ||| | ||| ||| | || || Sbjct 1500 AATGGAATCCTCAATGTGTCAGCTGCAGACAAAAGCACTGGCAAAGAGAACAAAATAACC 1559 Query 350693 ATTACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGAGAAAATGACACAAGATGCC 350752 || || ||||| ||| || | || || ||||||||||||||| ||| ||||| Sbjct 1560 ATCACAAATGACAAAGGCAGGTTGAGCAAGGAGGATATTGAGAAAATGGTACAGGATGCA 1619 Query 350753 GA 350754 || Sbjct 1620 GA 1621 Score = 104 bits (114), Expect = 7e-17 Identities = 364/554 (66%), Gaps = 16/554 (3%) Strand=Plus/Minus Query 183245 AATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGA 183304 ||| ||||| ||||| || |||||||| || || || || || ||||| || | | | Sbjct 1190 AATGGCAGCCTGAACTGCAGCACCATAGGCCACTGCCTCGTCAGGGTTGAT-GCCCTTGT 1132 Query 183305 TAAT-TCTTTGCCATTAAA-AAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTT 183362 | | || | ||||| || |||| ||| | || | || ||||| || ||||| || Sbjct 1131 TCAGGTCCCTTCCATTGAAGAAATCCTGCA-GCTGCTTCTGGATTTTAGGGATTCTGGTG 1073 Query 183363 GAACCACCGACTAATACTACTTCATCGATAT-TACTTTTACTAATTTGTGAATCTTTTAA 183421 ||||| || || || || | |||| ||| | | | || | || ||| | |||| | | Sbjct 1072 GAACCTCCCACCAAGACAATGTCATGGATCTGTGCCTTGTCCAACTTG-GCATCTCTCAG 1014 Query 183422 AACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTA--TACATAACTCTTCTAAT 183479 |||| || ||||| || | ||| || || | || | ||| ||| || || Sbjct 1013 GGCTTTCTCCACAGGCTCAAGGGTTCCCCTGAAGAGGTCGGAGTTCAT--CTCCTCAAAG 956 Query 183480 CTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATC 183539 | ||||| || | || | | || ||||| || | ||| | || || |||||||| Sbjct 955 CGAGCTCTGGTGATGGAGGTGTAGAAATCAATGCCCTCATAAAGAGAGTCGATTTCAATG 896 Query 183540 GATGTTTGTGTAGATG-ATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCG 183598 | || | || || | || | ||| || || || | ||||||||||| | || | Sbjct 895 CTGGCCTGGG-AGCTGGAGGACAGTGTCCTCTTGGCCCTCTCACATGCTGTGCGCAGCCT 837 Query 183599 ACGTAATGA--TCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTA 183656 | | || ||||| || | |||| |||| ||| ||| || || || || Sbjct 836 CCTCAGTGCCCTCTTG--TTCTGGCTAATGTCTTTCTTAAATTTCCTCTTGAACTCCTCC 779 Query 183657 ATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCA 183716 | ||| || | | | | ||||||| ||||| ||||| | || || || |||||| Sbjct 778 ACAAAGTGATTCACCATGCGATTATCAAAGTCTTCCCCACCCAGGTGAGTGTCTCCAGCA 719 Query 183717 GTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCA 183776 || ||||| || ||||| || || |||||||| ||| || || |||||||| |||||| Sbjct 718 GTGGCTTTGACCTCAAAGATGCCATCTTCAATGGTTAGGATAGAAACATCAAAAGTACCA 659 Query 183777 CCACCCAAATCAAA 183790 ||||| | ||||| Sbjct 658 CCACCTAGGTCAAA 645 >seq3207 Length=2023586 Score = 183 bits (202), Expect = 9e-41 Identities = 461/696 (66%), Gaps = 16/696 (2%) Strand=Plus/Plus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 || ||||| ||| | || || | ||||| ||||| || | ||| ||| | || Sbjct 1815615 ATTGGAATTGATCTTGGAACACCCTATTCATGTGTATGGGTATTTCAACATGGTAAAGTT 1815674 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||||||||| ||||| || || ||| | ||| | || || || || || || || Sbjct 1815675 GAAATAATTGCCAATGACCAGGGAAACGGGACATCACCCAGCTATGTGGCCTTCACAGAC 1815734 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || ||| | | ||||| ||| | || ||||| |||| ||| || || || ||||| Sbjct 1815735 ACAGAGAGACTAATTGGAGATGCAGCCAAAAACCAAGTTGCCATGAACCCTAACAATACT 1815794 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441 || |||||||| || || |||||||| || || ||| |||| | | || || Sbjct 1815795 GTATTTGATGCCAAACGTCTTATTGGCAGTAGGTTTGATGACCCCATTGTCCGGTCAGAC 1815854 Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501 | |||| || ||||||| || ||| | || ||| ||||| | | | ||| Sbjct 1815855 ATGAAACTTTGGCCTTTTAACGTGGTT---AGTGATAGTGGAAAACCCAAAGTACAAGTT 1815911 Query 349502 GAATATAAAGGTG-AACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGT 349560 || | ||||| | ||| ||||| || | || || ||| | || || ||||| || || Sbjct 1815912 GAGCACAAAGGAGAAACTAAAAC-CTTCTATCCTGAGGAAGTCTCCTCCATGGTCTTGGT 1815970 Query 349561 TAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTAC 349620 ||||||| || ||| | || || | || || | | || | | ||||| || || Sbjct 1815971 GAAAATGAGAGAGATTTCGGACGCCTTCTTGGGACACAAGGTTAACAACGCTGTCATCAC 1816030 Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 || ||||| || |||||||| | ||||| ||||| | ||||| || ||| || Sbjct 1816031 GGTCCCAGCTTACTTTAATGACTCACAGCGCCAGGCAACCGAGGATGCAGGAGTCATCGC 1816090 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 || |||||||| | || | || | ||| || || || || || ||||| || Sbjct 1816091 TGGACTAAATGTTTTTAGGGTCATCAGTGAGCCGACAGC-----CATCCGCCTATGGTCT 1816145 Query 349741 TGATAAAATGAGTGACCAA---GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || ||| || || || ||| ||| | || ||||| | || || ||||| Sbjct 1816146 GGACAAAGGGA---ACAAAGGGGAACGCAATGTATCGATCTTTGACCTTGGAGGGGGTAC 1816202 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||||||||| ||| | || || | ||||| ||||| ||||| || ||||| || || || Sbjct 1816203 TTTTGATGTGTCAGTCCTGGCAATAGAAGATGGAATATTTGAGGTGAAAGCCACAGCAGG 1816262 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 || ||||| || ||||| ||||| ||||| |||| Sbjct 1816263 GGACACACACCTGGGTGGGGAAGACTTTGACGATCG 1816298 >seq978 Length=374410 Score = 152 bits (168), Expect = 2e-31 Identities = 309/456 (68%), Gaps = 2/456 (0%) Strand=Plus/Minus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||| | || || |||||| | ||||| || || |||||||| || |||| || ||||| Sbjct 79691 AATGTCCTCATCTTTGATCTGGGTGGAGGCACCTTTGATGTTTCCATACTTACCATTGAA 79632 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 || || ||||| || || || ||||||||||||| |||||||||||||| || || ||| Sbjct 79631 GATGGCATTTTCGAGGTCAAGTCAACTGCTGGTGACACACATCTTGGTGGCGAGGACTTT 79572 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCT-AAAATTGATAT 349944 ||||||||| | || || ||| || || |||||| | ||| | || | || || Sbjct 79571 GATAATCGTATGGTAAACCACTTTATTGGCGAGTTTAAGAG-GAAGTTCAAGAAGGACAT 79513 Query 349945 TGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC 350004 | | | || || || | || || || | || || ||||| || || || ||| | Sbjct 79512 TACAAACAACAAGAGGGCTGTTCGACGTCTGCGCACAGCTTGTGAGCGAGCCAAACGTAC 79453 Query 350005 CTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTT 350064 | | || || | ||||| | ||||| ||||| || | ||| |||| || || Sbjct 79452 CCTCTCCTCCAGCACCCAGGCTAGCATTGAGATTGACTCGTTGTATGAGGGCACCGACTT 79393 Query 350065 CTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAAC 350124 || | || || ||| | ||||| ||||| || | | || || || | | || Sbjct 79392 CTACACCTCAATCACAAGGGCTCGTTTTGAGGAGCTCAATGCTGACCTCTTCCGTGGCAC 79333 Query 350125 AATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGA 350184 | |||| || ||||||||| | ||||| || ||| |||| |||||| |||| Sbjct 79332 ACTGGAACCCGTGGAAAAATCCCTGCGTGATGCTAAGATGGACAAATCCCAGATTCATGA 79273 Query 350185 AGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAA 350220 | ||| | || ||||| || ||||| |||||||| Sbjct 79272 TATTGTTCTTGTCGGTGGATCCACACGAATTCCAAA 79237 Score = 87.8 bits (96), Expect = 5e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| || | |||||||| || || || ||||| ||||| | || ||||| |||| Sbjct 79945 ATGCAGTGGTCACTGTACCTGCTTACTTCAATGACTCCCAGAGGCAAGCCACAAAGGATG 79886 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 | |||| |||||| || | ||||| || | || || ||||||||||||||||| || | Sbjct 79885 CAGGCACCATTGCCGGTCTTAATGTCCTGCGGATTATCAATGAACCCACTGCTGCTGCGA 79826 Query 349728 TTGCATATGGGCTTGATAAAA 349748 | || ||||| | || |||| Sbjct 79825 TAGCCTATGGTTTGGACAAAA 79805 >seq257 Length=13053552 Score = 91.5 bits (100), Expect = 4e-13 Identities = 130/180 (72%), Gaps = 5/180 (3%) Strand=Plus/Plus Query 349248 AAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACG 349307 |||| | |||||||||||| || || ||||||||||| ||||||| || || || || | Sbjct 6608296 AAAACGGTCGTGTAGAAATCATCGCCAATGATCAAGGAAACAGAATCACCCCTTCGTATG 6608355 Query 349308 TTGCATTTACC---GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CT 349363 | || || ||| || |||||| | ||||||||| |||| || || | ||||| | Sbjct 6608356 TGGCCTTCACCGCTGAGGGAGAGCGTCTCATTGGTGATGCTGCTAAGAA-CCAGCTGACC 6608414 Query 349364 GCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC 349423 | || || | || || |||||||| || ||| || | || ||| | | |||| | ||| Sbjct 6608415 TCCAACCCCGAGAACACTGTTTTTGACGCAAAGAGATTGATCGGTCGCACTTTTGCCGAC 6608474 >seq3021 Length=1423706 Score = 84.2 bits (92), Expect = 7e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||||||||| || || || || | ||| || ||||| || || ||||| ||||| |||| Sbjct 287162 CTTTTTGAATGTTGTAGTCTGACAGTGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGA 287221 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | ||||| |||||||||||||| || ||| Sbjct 287222 TCAGACGCTGCTGATCAGGAGGGATACCT 287250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515120150827745