Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02]
164,693 sequences; 563,609,416 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq51583 89.7 5e-13
>seq51583
Length=2687
Score = 89.7 bits (98), Expect = 5e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || | |||||| ||||||||||| || ||||| |||||||||||||| |||||
Sbjct 1265 ATGTAGGTGTTGATGAGCAGGCTGTACATCTCAGAGTGGATGTTCTCCATGGCGATCTGG 1324
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332
|| ||||| || || ||||| |||| | || ||||||
Sbjct 1325 AACCCGTAGAAACACCGGGCCTCCGTCACCTGCACTTCC 1363
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||||||||||||||| || ||||| || || |||| || |||||| |||| ||||
Sbjct 842 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGGCCTCTCTTCT 901
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096
| | ||| || || | ||| || || ||||| ||||| || ||||| ||||
Sbjct 902 TCAGCCAGAAGATGGAGGCAAAGGAACCAGAGAAGAAGATTCCCTCCACGG 952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516480148281240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |