Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq60745 100 2e-16 >seq60745 Length=27421 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| || |||||||| | || | || | ||||| || ||||| ||||||||||| Sbjct 2715 GTGATGTGAGCGATCATGTAGGTGAGGAGTGCGTAGCTGGCGATGTTGAAAGGCACCCCG 2656 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||| || | || | || || | |||||| || |||| || |||||||| || Sbjct 2655 AGGCCCATGTCGCCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAG 2596 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||||| ||| | || |||||||||| |||||| Sbjct 2595 AACTGACACAAGGCGTGGCAGGGGGGCAGCGCCAT 2561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346087936564010