Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq126953 84.2 2e-11 seq92653 82.4 9e-11 >seq126953 Length=2813 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || ||||||||||||| ||||| |||||||||||||||| | ||| |||| Sbjct 603 TTCTCCCCGTTGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGACACTGTCCAC 544 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 543 TATACTAACGAGGA 530 >seq92653 Length=553 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | ||||||||||||||||||||| || ||||||| || || ||||| ||||| Sbjct 79 TCTCCCTGTCAGGGAATCGAACCCTGGTCTTCCACGTGACAAGCAGAGATACTGTCCACT 20 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 19 ATACTAACGAGGA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570640420550040