Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02]
164,693 sequences; 563,609,416 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq129856 165 6e-36
>seq129856
Length=1559
Score = 165 bits (182), Expect = 6e-36
Identities = 179/235 (76%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858
|| ||||| ||| |||||||| ||||||| | ||||||||| |||||||| | | |||
Sbjct 794 CACTTCCCCACCTTCTCCTGCAAGGAGGACTGCGACATCATCACGGACACTGCC-GCCAA 852
Query 91859 -CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCT 91917
|| || | || |||||||||||| || ||| ||| |||||||| || || |||||
Sbjct 853 GCTCGAGCGCAGCTCCTTCTACTGGGGCCCCCTGGAGGTGGAGGAGGCCCACCGCATGCT 912
Query 91918 GCGCAACTCGGCACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTT 91977
||| || | | ||||||||||| ||||| || || ||| |||| ||||||||||| ||
Sbjct 913 GCGGGACGCCCCGCTGGGCAGCTTCCTCATCCGCGACAGCCGGCAGAAGGACGTCTTCTT 972
Query 91978 CACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032
||||||||| || ||| || ||| || ||||| ||| | || || ||||||
Sbjct 973 CACGCTGTCCTACCACGGCAAGAGCGGGCCGGTCAGCGTGCGCATCGACTACAAG 1027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355518569365279
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |