Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq60745 141 6e-29 >seq60745 Length=27421 Score = 141 bits (156), Expect = 6e-29 Identities = 137/175 (78%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || || || | || ||| |||||||| |||||||| ||||||||||||||| || || Sbjct 2721 AGTCCTGTGATGTGAGCGATCATGTAGGTGAGGAGTGCGTAGCTGGCGATGTTGAAAGGC 2662 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 ||||||| |||||||| ||| || | |||||| ||||||||||| ||||| |||| | Sbjct 2661 ACCCCGAGGCCCATGTCGCCC-GAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCACA 2603 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 |||||| |||||||||| || || ||| || || || || || ||| || |||| Sbjct 2602 CACGTAGAACTGACACAAGGCGTGGCAGGGGGGCAGCGCCATGAGGGGCAGGTCT 2548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339454877191089