Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02]
164,693 sequences; 563,609,416 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq137229 95.1 1e-14
>seq137229
Length=11157
Score = 95.1 bits (104), Expect = 1e-14
Identities = 186/271 (69%), Gaps = 7/271 (3%)
Strand=Plus/Plus
Query 129580 GGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTAT 129639
|||||| |||| | || || || ||||| || |||||||| | | ||| || ||| ||
Sbjct 2113 GGATAGAAGTTTACTTCAATGATCTTGTTCAAGTTCTTGACGATTACTTTGGTCACGGAT 2172
Query 129640 TTTAACATTTCAAAATTGTAC-TCGCCTACATCGATGTCG-ACAAATTGATTGACACAAA 129697
|| ||||||| | || || || || | || || ||| |||| | |
Sbjct 2173 GCTAGTTTTTCAAAGTCAAACGTCTGCT-CAGGGGTGACGTACATGTTGAGCGCGA---- 2227
Query 129698 TCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGC 129757
| ||||||| |||||||||||| |||| | | |||| || |||||||| | ||
Sbjct 2228 TTGAGGCCAGATTGCAGACGGCTACCTCGTCGTGGCTGGTGTATTCAACAATTTCTGTGC 2287
Query 129758 ACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCAT 129817
| | || || || |||||||||| || || || || || ||| |||||| || |
Sbjct 2288 AGAGGTTGCTGGACTTGATGGTGCCCAGATTCTGGTGGTTGCTCTTCCGGTTGCAGGCGT 2347
Query 129818 CTTTGTACATCATGTACGGCGTGCCCGTTTC 129848
||||||||| |||||| ||||| || |||||
Sbjct 2348 CTTTGTACAGCATGTATGGCGTACCAGTTTC 2378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418885523663545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |