Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq116110 84.2 4e-11 seq51583 84.2 4e-11 >seq116110 Length=25029 Score = 84.2 bits (92), Expect = 4e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416 ||||||||||| || |||||||||||||| ||||| ||||| ||| | || || || Sbjct 14540 CCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCGATAGTGTC-GCTGGGCTCAACCTC 14482 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || ||||| | ||||| ||||| |||||||| Sbjct 14481 AAGGGTGATGGTCTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 14437 >seq51583 Length=2687 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| |||||| | |||||||||| || || ||| |||||||||| ||||||||| Sbjct 89 CATCACGCCCATCCTCTGGTACTCGCCCACGCGCTTCTCAAAGAAGTTGGTCTTGCCCTC 148 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 || || ||| |||||||||||| ||||||||||| Sbjct 149 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTCTC 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919725090525960