Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq60745 107 2e-18 >seq60745 Length=27421 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 ||||| | ||| || || | ||| | |||||||| ||||| ||||| || || | ||| Sbjct 2709 TGAGCGATCATGTAGGTGAGGAGTGCGTAGCTGGCGATGTTGAAAGGCACCCCGAGGCCC 2650 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 ||||| ||||| | ||| ||||||||||| || ||||| |||||| || || || ||| Sbjct 2649 ATGTCGCCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAGAACTGA 2590 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || || ||| ||||| || |||||||| Sbjct 2589 CACAAGGCGTGGCAGGGGGGCAGCGCCAT 2561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440464162368120