Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq147906 82.4 6e-11 >seq147906 Length=48637 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACA 108523 |||||| | |||||||||||||||||||| || || || || || ||||| |||| Sbjct 40203 AGTGGGCTCGAGATCACAGGGTTCACCACAAATATTCGGAGACAGATGCTGACCCGCACA 40144 Query 108524 ACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCG 108583 ||||| | |||| |||| ||| | ||| | || ||||| ||| || ||| |||| | Sbjct 40143 ACGCCGTCCGGGGCTTCTTCTTCGCTCACATTGGCTGGCTGATGGTGCGCAAACACCCGG 40084 Query 108584 ACGTGATC 108591 |||| ||| Sbjct 40083 ACGTCATC 40076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381006507186792