Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq101000 84.2 3e-11 >seq101000 Length=9675 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 ||||| || || |||| || || || |||| | || |||||||| ||||| || || Sbjct 894 TCATCCCTGCTAATCAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAATCCTCTCTTCTTG 835 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | |||| | || || || || || ||||| ||||| || || || ||||||||||| ||| Sbjct 834 AGCCAATAGATGGCAGCGAATGAGCCAGAGAAGAAGATGCCCTCCACTGCTGCAAAAGCT 775 Query 37320 ACAA 37323 |||| Sbjct 774 ACAA 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591097419615720