Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq135026 122 7e-23 >seq135026 Length=2337 Score = 122 bits (134), Expect = 7e-23 Identities = 130/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || ||||||| |||||| || | || ||| || ||| Sbjct 1083 AGATCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTCCTGACGAACCCGTCA 1142 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| | ||| | |||||||| |||||||||||| | || ||||||||| Sbjct 1143 AGCATGTCCTGCAGCTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGGTCGTTTTTG 1202 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || || || || || || || || |||| || |||| Sbjct 1203 CTATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTTGGGT 1254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412012946017649