Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq65587 116 3e-21 >seq65587 Length=12959 Score = 116 bits (128), Expect = 3e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 || || ||||| || | ||||||||| | || |||| ||| ||| |||||| ||||| Sbjct 4907 AGTATCTGGGGCCCGACATGCGATGGCCTCGACCGCATCGTTGAGCAGTGTGACCTGCCC 4966 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || || || |||||||||||||| | ||||| ||||||||||| |||| | ||| | | Sbjct 4967 GACCTGCAGGTGGGCGACTGGCTGGTCTTTGACAACATGGGCGCCTACACCGTGGCCGCC 5026 Query 21245 TCTTCAACCTTTAACGGCTTCC 21266 || || ||||| |||||||||| Sbjct 5027 TCCTCCACCTTCAACGGCTTCC 5048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462591316056240