Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq156247 87.8 4e-12 >seq156247 Length=2104 Score = 87.8 bits (96), Expect = 4e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 60147 GAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCA 60206 |||| | |||||||| | | ||||| || | || || | || || |||||||||| Sbjct 306 GAGCTCTGTGGTGGTATTTCGTCTCTAAGGGCGTCGAGTATCTGGACACAGTGTTTTTCA 247 Query 60207 TACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGT 60266 | || ||||| || || || ||||||| ||| || ||||| || || || | || |||| Sbjct 246 TCCTGAGGAAGAAATTCAACCAGGTTACTTTCTTGCACGTCTACCACCACTGCACCATGT 187 Query 60267 TTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA 60309 | ||| | | ||| | ||||| |||||| | || ||||| || Sbjct 186 TCACTCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACA 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979755417890927