Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq156247 84.2 4e-11 >seq156247 Length=2104 Score = 84.2 bits (92), Expect = 4e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436 |||| | |||||||| | | ||||| || | || || | || ||||||||||||| Sbjct 306 GAGCTCTGTGGTGGTATTTCGTCTCTAAGGGCGTCGAGTATCTGGACACAGTGTTTTTCA 247 Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTC-TACACGTATATCATCATTTTACTATG 58495 | || ||||| || || || || |||| ||||| | ||||| || || || | || ||| Sbjct 246 TCCTGAGGAAGAAATTCAACCAGGTTA-CTTTCTTGCACGTCTACCACCACTGCACCATG 188 Query 58496 TTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 || ||| | | ||| | || || |||||| | |||||||| ||| Sbjct 187 TTCACTCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901551381240480