Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq156247 120 4e-22 >seq156247 Length=2104 Score = 120 bits (132), Expect = 4e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 32668 GAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCA 32727 |||| |||||| ||||| ||||||| || | || ||||| || || | || |||| Sbjct 306 GAGCTCTGTGGTGGTATTTCGTCTCTAAGGGCGTCGAGTATCTGGACACAGTGTTTTTCA 247 Query 32728 TAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGT 32787 | |||| |||||||| ||||| |||| || |||||||| |||||||| | ||||||| Sbjct 246 TCCTGAGGAAGAAATTCAACCAGGTTACTTTCTTGCACGTCTACCACCACTGCACCATGT 187 Query 32788 TTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 | ||| | | ||||| || || |||||| | |||||||||||| Sbjct 186 TCACTCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601939054306320