Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq60745 132 4e-26 >seq60745 Length=27421 Score = 132 bits (146), Expect = 4e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || || || |||||||| ||||| |||||| || | || || |||||||| | Sbjct 2549 GACCTGCCCCTCATGGCGCTGCCCCCCTGCCACGCCTTGTGTCAGTTCTACGTGTGTGAC 2608 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || |||||||| || ||||| || || || ||||| |||||||| | |||||||| ||| Sbjct 2609 GGCGAGCTGTCGTGTCAGCTGTACCAGCGCTCGGGCGACATGGGCCTCGGGGTGCCTTTC 2668 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| || ||||| |||||||||||||| Sbjct 2669 AACATCGCCAGCTACGCACTCCTCACCTACATGATCGCTCA 2709 Score = 132 bits (146), Expect = 4e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 |||||||||||||| ||||| || ||||| || || |||||||| |||||||| | ||| Sbjct 2709 TGAGCGATCATGTAGGTGAGGAGTGCGTAGCTGGCGATGTTGAAAGGCACCCCGAGGCCC 2650 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| ||||| || || || ||||| || |||||||| || | |||||||| || Sbjct 2649 ATGTCGCCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAGAACTGA 2590 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || | || |||||| ||||| |||||||| || || || || Sbjct 2589 CACAAGGCGTGGCAGGGGGGCAGCGCCATGAGGGGCAGGTC 2549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447339579006960