Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02] 164,693 sequences; 563,609,416 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq52993 118 3e-21 >seq52993 Length=3359 Score = 118 bits (130), Expect = 3e-21 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615 |||| || || ||| |||| || ||||| || || || ||||||||| | || ||||| Sbjct 1807 TTTATAATGTAATTGTTACAGCCCATGCTTTCGTAATAATTTTCTTTATAGTAATGCCAA 1866 Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675 |||| || || |||||||| || || | ||||| ||||||| || ||||||||||||| Sbjct 1867 TTATAATTGGAGGTTTCGGGAACTGGCTAGTTCCCCTAATGATCGGCGCTCCTGATATGG 1926 Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 | ||||| | | || || ||||| |||||| | || || || || || || || Sbjct 1927 CCTTTCCTCGAATGAATAACATAAGCTTTTGACTCCTTCCCCCATCTTTTTTACT 1981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1190014805256942