Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cottus_20rhenanus_20[genbank_20GCA_5F001455555.1_202015-12-02]
164,693 sequences; 563,609,416 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq101000 100 2e-16
seq51583 86.0 5e-12
>seq101000
Length=9675
Score = 100 bits (110), Expect = 2e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| || ||||||||||| ||||| || | || | || |||||||| |||||||| ||
Sbjct 894 TCATCCCTGCTAATCAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAATCCTCTCTTCTTG 835
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
|||||| | || || || ||||| ||||| ||||| ||||| || || || ||||| |||
Sbjct 834 AGCCAATAGATGGCAGCGAATGAGCCAGAGAAGAAGATGCCCTCCACTGCTGCAAAAGCT 775
Query 4692 ACTAATCG 4699
|| | |||
Sbjct 774 ACAATTCG 767
>seq51583
Length=2687
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
||||||||||| || || ||||| || || || | || ||||| | |||||||| ||
Sbjct 844 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGGCCTCTCTTCTTC 903
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| || || | |||||| || ||||| ||||| || || || ||||| || || ||
Sbjct 904 AGCCAGAAGATGGAGGCAAAGGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGGCC 963
Query 4692 AC 4693
||
Sbjct 964 AC 965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426192427777769
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |