Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 >seq3 Length=16251686 Score = 111 bits (122), Expect = 1e-19 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| || || || || || ||||||||||| || || ||||| ||||| || || |||| Sbjct 14876090 CTTTGTACTCGGCACCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCTT 14876149 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||||| |||||||| || || | ||| | | ||||||||| || ||||| | Sbjct 14876150 CTTCTCTGTCTGTGAAACCAAGCTTGTCCAGAAACGCACGAGATCCATTGGCGTCCCAGA 14876209 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGAT-CCTCTGATAAAC---CAC 102208 | | ||| || |||| ||||||||| || || ||| ||| |||||||| ||| Sbjct 14876210 TTTTCACCCCCTTCTCTGAAAGCTCTTTGGCGTTTGTTGATCCCTGTGATAAACACACAC 14876269 Query 102209 AACA 102212 |||| Sbjct 14876270 AACA 14876273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361120689311393