Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq11 145 9e-30 >seq11 Length=20528231 Score = 145 bits (160), Expect = 9e-30 Identities = 196/271 (72%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 83126 CCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGA 83185 ||||||| || | | ||||||||| |||||||||||||||||||| | ||| || || Sbjct 3545491 CCGTCAGGCCCGATGAGGAACTTCTCAAAGTTCCAGGCCACGTCGTTCCTGCAGACGGGG 3545550 Query 83186 GACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGC 83245 |||| ||| || ||||||| ||| || | | || ||||||||| || ||| Sbjct 3545551 CTCCAGATGATGCACTTGGGGTCGGTCATCAGGGAGGTCGGGTCGTCGCTGGGGAACGGG 3545610 Query 83246 AGGGCCTCTCGTAGGAAGGCGAAGAGCGGAT--GTGCCCTTGCACCGTTGACCTCGCACT 83303 || ||||| ||||| |||| || |||| | | |||| ||| || || | || Sbjct 3545611 AGCTTCTCTCTCAGGAACACGAACAGAGGATCGGCGTCCTT--ACCATTCACGTTCACCT 3545668 Query 83304 TCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAG 83363 |||| | |||| || || ||||| |||||||||||||||||||||| |||||| || Sbjct 3545669 TCTCCAGGAGCTGGAATTTTGGCTCAAAGCCGTTCCCAGGACGGACGTACTTCAGAGACT 3545728 Query 83364 GCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394 ||| ||| || |||||| | ||| ||||| Sbjct 3545729 GCAGGATTTCTTCATTCTTGCAGTTCTCCTG 3545759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608571217955720